EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11600 contig Csv1_Contig11600:39..441. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEA7 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas aeruginosa (strain PA7) GN=hisF PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 7.976e-69
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVR+VQDIRNLLNAGADKVSINTAAVFNPEFVGEAA+ FGSQCIVVAIDAKKVS PGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAERFGSQCIVVAIDAKKVSAPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEAB (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hisF PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 1.361e-68
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVR+VQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVS PGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEA8 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas aeruginosa (strain LESB58) GN=hisF PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 1.361e-68
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVR+VQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVS PGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS61_PSEAE (Imidazole glycerol phosphate synthase subunit hisF1 OS=Pseudomonas aeruginosa GN=hisF1 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 1.361e-68
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVR+VQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVS PGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEPW (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas putida (strain W619) GN=hisF PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.777e-68
Identity = 129/134 (96.27%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRY+EQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVS PGE PRWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYNEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEMY (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas mendocina (strain ymp) GN=hisF PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.965e-67
Identity = 128/134 (95.52%), Postives = 129/134 (96.27%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAK+VS PGE  RWEIFT
Sbjct:   15 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAARFGSQCIVVAIDAKRVSAPGEPGRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_AZOVD (Imidazole glycerol phosphate synthase subunit hisF OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=hisF PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 1.965e-67
Identity = 127/134 (94.78%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+FENIRDAGDPVEIA+RYDEQGADEITFLDITAS +GRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAA  FGSQCIVVAIDAKKVSGPGE PRWEIFT
Sbjct:   15 NGRVVKGVRFENIRDAGDPVEIAQRYDEQGADEITFLDITASHEGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAGRFGSQCIVVAIDAKKVSGPGEAPRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSEU5 (Imidazole glycerol phosphate synthase subunit hisF OS=Pseudomonas stutzeri (strain A1501) GN=hisF PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 2.172e-66
Identity = 126/134 (94.03%), Postives = 128/134 (95.52%), Query Frame = 1 
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+FENIRDAGDPVEIARRYDEQGADEITFLDITASVD RDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNP+FVGEAA  FGSQCIVVAIDAKKVS PGE  RWEIFT
Sbjct:   15 NGRVVKGVQFENIRDAGDPVEIARRYDEQGADEITFLDITASVDNRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPDFVGEAADRFGSQCIVVAIDAKKVSAPGEPGRWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_HAHCH (Imidazole glycerol phosphate synthase subunit hisF OS=Hahella chejuensis (strain KCTC 2396) GN=hisF PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 3.968e-60
Identity = 113/133 (84.96%), Postives = 123/133 (92.48%), Query Frame = 1 
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV+F +IRDAGDPVE+A+RYDEQGADEITFLDITAS +GRDTT+HTVERMASQVFIPLTVGGG+R ++DIR +LNAGADKVSINTAAVF PEFVGEAA  FGSQCIVVAIDAKKVS PGE  RWEIFT
Sbjct:   16 GRVVKGVQFVDIRDAGDPVEVAKRYDEQGADEITFLDITASHEGRDTTVHTVERMASQVFIPLTVGGGIRKLEDIRTMLNAGADKVSINTAAVFTPEFVGEAAARFGSQCIVVAIDAKKVSAPGEEERWEIFT 148
[Close]
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_MARAV (Imidazole glycerol phosphate synthase subunit hisF OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=hisF PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.081e-57
Identity = 111/133 (83.46%), Postives = 119/133 (89.47%), Query Frame = 1 
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F +IRDAGDPVE+ARRY+EQGADEITFLDITAS + RDTT  TVERMA++VFIPLTVGGGVRTV DIR LLNAGADKVSINTAAVFNPEFV EAA+ FG QCIVVAIDAK+VS  GE PRWEIFT
Sbjct:   16 GRVVKGVNFVDIRDAGDPVEVARRYNEQGADEITFLDITASSESRDTTYETVERMAAEVFIPLTVGGGVRTVDDIRKLLNAGADKVSINTAAVFNPEFVREAAERFGRQCIVVAIDAKRVSAAGEEPRWEIFT 148
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_PSEA77.976e-6996.27Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEAB1.361e-6896.27Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEA81.361e-6896.27Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS61_PSEAE1.361e-6896.27Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEPW1.777e-6896.27Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEMY1.965e-6795.52Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_AZOVD1.965e-6794.78Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSEU52.172e-6694.03Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_HAHCH3.968e-6084.96Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_MARAV1.081e-5783.46Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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