EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_THICR (Imidazole glycerol phosphate synthase subunit hisF OS=Thiomicrospira crunogena (strain XCL-2) GN=hisF PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.236e-53
Identity = 100/134 (74.63%), Postives = 117/134 (87.31%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVE+A+RYDEQGADEITFLDITA+   RDT +H VE +ASQVFIPLTVGGG+R+++D+R +LNAGADKV+IN+AA+FNP FV EA   FGSQCIVVAIDAKKVS  GE  +WEIFT
Sbjct:   15 NGRVVKGVQFVDIRDAGDPVEVAKRYDEQGADEITFLDITATAHERDTIVHVVEEVASQVFIPLTVGGGIRSIEDVRTMLNAGADKVAINSAAIFNPAFVKEACDTFGSQCIVVAIDAKKVSPKGEPDKWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_NITOC (Imidazole glycerol phosphate synthase subunit hisF OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=hisF PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.236e-53
Identity = 104/134 (77.61%), Postives = 115/134 (85.82%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F NIRDAGDPVEIARRYDEQGADEITFLDITAS D RDT +H VE +A+QVFIPLTVGGG+R ++DIR LL AGADKV INTAAV  PE V EAA+ FGSQCIVVAIDAK+VS   E P+WE+FT
Sbjct:   15 NGRVVKGVRFVNIRDAGDPVEIARRYDEQGADEITFLDITASSDNRDTMVHVVEEVAAQVFIPLTVGGGIRYLEDIRRLLIAGADKVGINTAAVQRPELVREAAERFGSQCIVVAIDAKQVSSADEPPQWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSYA2 (Imidazole glycerol phosphate synthase subunit hisF OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=hisF PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.615e-53
Identity = 105/138 (76.09%), Postives = 119/138 (86.23%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGE----TPRWEIFT 402
            NGRVVKGV+F +I+DAGDPVE+A+RY+EQGADEITFLDITA+ D RDTT HTVERMA  VF+PLTVGGGVR + DIRNLLNAGADKV+IN+AAVF PEFVGEAAQ FG+QCIVVAIDAK+V+         PRWEIFT
Sbjct:   14 NGRVVKGVQFVDIKDAGDPVEVAKRYNEQGADEITFLDITATSDERDTTYHTVERMAETVFVPLTVGGGVRKIADIRNLLNAGADKVAINSAAVFTPEFVGEAAQKFGNQCIVVAIDAKRVADIEVDGIIMPRWEIFT 151          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_METCA (Imidazole glycerol phosphate synthase subunit hisF OS=Methylococcus capsulatus GN=hisF PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.109e-53
Identity = 103/134 (76.87%), Postives = 118/134 (88.06%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVEIARRYD +GADE+ FLDITAS D R+T +H VE++A +VFIPLTVGGG+RT+ DIR +LNAGADKVSINTAAVFNPEFV EAA+ FGSQCIVVAIDAK+VS   + PRWEIFT
Sbjct:   14 NGRVVKGVRFVDIRDAGDPVEIARRYDREGADELAFLDITASSDDRETMVHVVEQVAGEVFIPLTVGGGIRTLDDIRRMLNAGADKVSINTAAVFNPEFVREAAERFGSQCIVVAIDAKQVS--EDPPRWEIFT 145          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_RALSO (Imidazole glycerol phosphate synthase subunit hisF OS=Ralstonia solanacearum GN=hisF PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.597e-53
Identity = 99/134 (73.88%), Postives = 115/134 (85.82%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV F  +RDAGDPVEIARRYDEQGADEITFLDITA+ DGRD  LH +E +ASQVFIPLTVGGGVR ++D+R LLNAGADK+S+N++AV NP+ V +A+   G+QCIVVAIDAKKVS  GE PRWE+FT
Sbjct:   14 NGRVVKGVNFVELRDAGDPVEIARRYDEQGADEITFLDITATSDGRDLILHIIEAVASQVFIPLTVGGGVRALEDVRRLLNAGADKISMNSSAVANPQLVSDASARHGAQCIVVAIDAKKVSADGEPPRWEVFT 147          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_PSYCK (Imidazole glycerol phosphate synthase subunit hisF OS=Psychrobacter cryohalolentis (strain K5) GN=hisF PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.698e-53
Identity = 104/138 (75.36%), Postives = 119/138 (86.23%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGE----TPRWEIFT 402
            NGRVVKGV+F +I+DAGDPVE+A+RY+EQGADEITFLDITA+ D RDTT HTVERMA  VF+PLTVGGGVR + DIRNLLNAGADKV+IN+AAVF PEFVGEA+Q FG+QCIVVAIDAK+V+         PRWEIFT
Sbjct:   14 NGRVVKGVQFVDIKDAGDPVEVAKRYNEQGADEITFLDITATNDERDTTYHTVERMAETVFVPLTVGGGVRKIADIRNLLNAGADKVAINSAAVFTPEFVGEASQKFGNQCIVVAIDAKRVADIEVDGIIMPRWEIFT 151          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_ACIBT (Imidazole glycerol phosphate synthase subunit hisF OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=hisF PE=3 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 8.013e-53
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVE+ARRY+EQGADEITFLDITA+  GRDTT  TVERMA  VF+PLTVGGGVR V+DIR LLNAGADKVSIN+AAVFNPEFV EA+QHFG+QCIVVAIDAKK        +WEIFT
Sbjct:   14 NGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRDTTYRTVERMAETVFVPLTVGGGVRKVEDIRALLNAGADKVSINSAAVFNPEFVQEASQHFGAQCIVVAIDAKKTG----DNKWEIFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_ACIBC (Imidazole glycerol phosphate synthase subunit hisF OS=Acinetobacter baumannii (strain ACICU) GN=hisF PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 8.013e-53
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVE+ARRY+EQGADEITFLDITA+  GRDTT  TVERMA  VF+PLTVGGGVR V+DIR LLNAGADKVSIN+AAVFNPEFV EA+QHFG+QCIVVAIDAKK        +WEIFT
Sbjct:   14 NGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRDTTYRTVERMAETVFVPLTVGGGVRKVEDIRALLNAGADKVSINSAAVFNPEFVQEASQHFGAQCIVVAIDAKKTG----DNKWEIFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_ACIB5 (Imidazole glycerol phosphate synthase subunit hisF OS=Acinetobacter baumannii (strain AB0057) GN=hisF PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 8.013e-53
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVE+ARRY+EQGADEITFLDITA+  GRDTT  TVERMA  VF+PLTVGGGVR V+DIR LLNAGADKVSIN+AAVFNPEFV EA+QHFG+QCIVVAIDAKK        +WEIFT
Sbjct:   14 NGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRDTTYRTVERMAETVFVPLTVGGGVRKVEDIRALLNAGADKVSINSAAVFNPEFVQEASQHFGAQCIVVAIDAKKTG----DNKWEIFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_ACIB3 (Imidazole glycerol phosphate synthase subunit hisF OS=Acinetobacter baumannii (strain AB307-0294) GN=hisF PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 8.013e-53
Identity = 105/134 (78.36%), Postives = 116/134 (86.57%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV+F +IRDAGDPVE+ARRY+EQGADEITFLDITA+  GRDTT  TVERMA  VF+PLTVGGGVR V+DIR LLNAGADKVSIN+AAVFNPEFV EA+QHFG+QCIVVAIDAKK        +WEIFT
Sbjct:   14 NGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRDTTYRTVERMAETVFVPLTVGGGVRKVEDIRALLNAGADKVSINSAAVFNPEFVQEASQHFGAQCIVVAIDAKKTG----DNKWEIFT 143          
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_THICR1.236e-5374.63Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_NITOC1.236e-5377.61Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSYA21.615e-5376.09Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_METCA2.109e-5376.87Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_RALSO3.597e-5373.88Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_PSYCK4.698e-5375.36Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ACIBT8.013e-5378.36Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ACIBC8.013e-5378.36Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ACIB58.013e-5378.36Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_ACIB38.013e-5378.36Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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