EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11600 contig Csv1_Contig11600:39..441. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURMA (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia mallei GN=hisF PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURM9 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia mallei (strain NCTC 10229) GN=hisF PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURM7 (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia mallei (strain NCTC 10247) GN=hisF PE=3 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.397e-51
Identity = 98/133 (73.68%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD QGADE+TFLDITA+ DGRD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP  V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDAQGADELTFLDITATSDGRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPPLVRDAADKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURCJ (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hisF PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 5.743e-51
Identity = 97/133 (72.93%), Postives = 113/133 (84.96%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD+QGADE+TFLDITA+ D RD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADKVS+N++AV NP+ V +AA  +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKVSMNSSAVANPQLVRDAADKYGSQCIVVAIDAKRVSADGEAPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_AZOC5 (Imidazole glycerol phosphate synthase subunit hisF OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=hisF PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 9.796e-51
Identity = 100/134 (74.63%), Postives = 111/134 (82.84%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV+F ++RDAGDPVE AR YD  GADE+TFLDITAS + R T L  V R A Q F+PLTVGGGVRTV+D+R LL AGADKVSINTAAV    FVGEAA+ FG QCIVVAIDAK+VSGPGETPRWEIFT
Sbjct:   14 DGRVVKGVQFVDLRDAGDPVESARAYDAAGADELTFLDITASHENRGTILDVVRRTAEQCFMPLTVGGGVRTVEDVRALLQAGADKVSINTAAVHRRAFVGEAAEKFGEQCIVVAIDAKQVSGPGETPRWEIFT 147          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURXL (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia xenovorans (strain LB400) GN=hisF PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.182e-50
Identity = 95/133 (71.43%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD+QGADE+TFLDITA+ D RD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADK+S+N++AV NP+ V +A   +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDKYGSQCIVVAIDAKRVSAEGEVPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_NITEC (Imidazole glycerol phosphate synthase subunit hisF OS=Nitrosomonas eutropha (strain C91) GN=hisF PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.850e-50
Identity = 96/135 (71.11%), Postives = 115/135 (85.19%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVS-GPGETPRWEIFT 402
            +GRVVKGV F ++RDAGDPVEIAR Y+EQGADE+ FLDITASV+ RD  LH VE++ASQVFIPLTVGGGV   +D+R LLNAGADKVSINT+AV NPE + E+A H+GSQCIV+AIDA++ S G  E+PRWE+FT
Sbjct:   15 DGRVVKGVNFVSLRDAGDPVEIARSYNEQGADELVFLDITASVENRDLILHIVEKVASQVFIPLTVGGGVCKAEDVRRLLNAGADKVSINTSAVLNPELIKESADHYGSQCIVIAIDARQTSDGNPESPRWEVFT 149          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BURPP (Imidazole glycerol phosphate synthase subunit hisF OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hisF PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.850e-50
Identity = 95/133 (71.43%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYD+QGADE+TFLDITA+ D RD  L  +E +ASQVFIPLTVGGGVR V+D+R LLNAGADK+S+N++AV NP+ V +A   +GSQCIVVAIDAK+VS  GE PRWE+FT
Sbjct:   16 GRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDKYGSQCIVVAIDAKRVSADGEPPRWEVFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BORA1 (Imidazole glycerol phosphate synthase subunit hisF OS=Bordetella avium (strain 197N) GN=hisF PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.722e-50
Identity = 96/133 (72.18%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F N+ DAGDPVEIARRY+EQGADE+TFLDITA+ DGRD  L  +E++ASQVFIPLTVGGGVR V D++ LLNAGADK+SIN+AA+ NPE V  AA + GSQCIVVAIDA++VS  GE  RWE+FT
Sbjct:   25 GRVVKGVNFVNLTDAGDPVEIARRYNEQGADELTFLDITATSDGRDLILPIIEQVASQVFIPLTVGGGVRQVSDVQRLLNAGADKISINSAAISNPELVRAAADYHGSQCIVVAIDARRVSSEGEAARWEVFT 157          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_CHRVO (Imidazole glycerol phosphate synthase subunit hisF OS=Chromobacterium violaceum GN=hisF PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.862e-50
Identity = 99/133 (74.44%), Postives = 113/133 (84.96%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRY+EQGADE+TFLDITAS D RD  LH +E +A QVFIPLTVGGGVR++ DIR LLNAGADKVSINTAAV +PEFV +A++HFG+QCIVVA+DAK V+   E  RWEIFT
Sbjct:   15 GRVVKGVNFLGLRDAGDPVEIARRYNEQGADELTFLDITASSDQRDIILHVIEAVADQVFIPLTVGGGVRSIADIRRLLNAGADKVSINTAAVTHPEFVQQASEHFGNQCIVVALDAKAVT--PENDRWEIFT 145          
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_BURMA4.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURM94.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURM74.397e-5173.68Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURCJ5.743e-5172.93Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_AZOC59.796e-5174.63Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURXL2.182e-5071.43Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_NITEC2.850e-5071.11Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BURPP2.850e-5071.43Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BORA13.722e-5072.18Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_CHRVO4.862e-5074.44Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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