EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_AZOSE (Imidazole glycerol phosphate synthase subunit hisF OS=Azoarcus sp. (strain EbN1) GN=hisF PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.349e-50
Identity = 102/133 (76.69%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F  +RDAGDPVEIARRYDEQGADEITFLDITAS D RD  LH VE++A QVFIPLTVGGGVRTV+D+R LLNAGADKVSINTAAV NP+ V EAA   GSQCIVVAIDAK+ + PG   RW++FT
Sbjct:   15 GRVVKGVNFVELRDAGDPVEIARRYDEQGADEITFLDITASSDARDIILHVVEQVAEQVFIPLTVGGGVRTVEDVRRLLNAGADKVSINTAAVNNPQVVAEAAGKVGSQCIVVAIDAKQ-TAPG---RWQVFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BORPE (Imidazole glycerol phosphate synthase subunit hisF OS=Bordetella pertussis GN=hisF PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.847e-49
Identity = 96/133 (72.18%), Postives = 111/133 (83.46%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F N+ DAGDPVEIARRY+EQGADE+TFLDITA+ DGRD  L  +E++ASQVFIPLTVGGGVR V D++ LLNAGADK+SIN+AAV NPE V  AA + GSQCIVVAIDA++ S  GE  RWE+FT
Sbjct:   27 GRVVKGVNFVNLTDAGDPVEIARRYNEQGADELTFLDITATSDGRDLILPIIEQVASQVFIPLTVGGGVRQVSDVQRLLNAGADKISINSAAVANPELVRAAADYHGSQCIVVAIDARRSSAEGEPARWEVFT 159          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BORBR (Imidazole glycerol phosphate synthase subunit hisF OS=Bordetella bronchiseptica GN=hisF PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.847e-49
Identity = 96/133 (72.18%), Postives = 111/133 (83.46%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F N+ DAGDPVEIARRY+EQGADE+TFLDITA+ DGRD  L  +E++ASQVFIPLTVGGGVR V D++ LLNAGADK+SIN+AAV NPE V  AA + GSQCIVVAIDA++ S  GE  RWE+FT
Sbjct:   27 GRVVKGVNFVNLTDAGDPVEIARRYNEQGADELTFLDITATSDGRDLILPIIEQVASQVFIPLTVGGGVRQVSDVQRLLNAGADKISINSAAVANPELVRAAADYHGSQCIVVAIDARRSSAEGEPARWEVFT 159          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_AZOSB (Imidazole glycerol phosphate synthase subunit hisF OS=Azoarcus sp. (strain BH72) GN=hisF PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.151e-49
Identity = 99/133 (74.44%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F ++RDAGDPVE+ARRYD QGADEITFLDITAS D RD  LH VER+A QVFIPLTVGGGVR+V+D+R LLNAGADKVSINTAAV NP  V EA+   GSQCIVVA+DAK+ +GPG   +WE+FT
Sbjct:   15 GRVVKGVNFVDLRDAGDPVEVARRYDAQGADEITFLDITASSDDRDIILHVVERVAEQVFIPLTVGGGVRSVEDVRRLLNAGADKVSINTAAVNNPSIVAEASGKVGSQCIVVAVDAKQ-TGPG---KWEVFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_METNO (Imidazole glycerol phosphate synthase subunit hisF OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=hisF PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.116e-49
Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV+F ++RDAGDPVE A+ YD  GADE+ FLDITAS + R   L  V+R A   F+PLTVGGGVRTV+DIR LL AGADKVSINTAAV NP+FV EAA+ FG+QCIVVAIDAK+VSGPGE PRWEIFT
Sbjct:   14 DGRVVKGVQFLDLRDAGDPVEAAKAYDRAGADELCFLDITASHEARGILLDVVQRTAEACFMPLTVGGGVRTVEDIRALLLAGADKVSINTAAVNNPDFVAEAAEKFGAQCIVVAIDAKRVSGPGEPPRWEIFT 147          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_NITMU (Imidazole glycerol phosphate synthase subunit hisF OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=hisF PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.375e-49
Identity = 96/134 (71.64%), Postives = 114/134 (85.07%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGVKF ++RDAGDP+EIARRYD+QGADE+TFLDITAS D RD  LH +E +A+QVFIPLTVGGGVR V+D+R LLNAGADKVSINT+A+ NP+ V +AA  +GSQCIVVAIDAK+ +G G    WE+FT
Sbjct:   15 NGRVVKGVKFVSLRDAGDPIEIARRYDDQGADELTFLDITASSDDRDLILHIIEEVAAQVFIPLTVGGGVRKVEDVRRLLNAGADKVSINTSAIQNPQLVADAAGRYGSQCIVVAIDAKR-AGQG----WEVFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BORPA (Imidazole glycerol phosphate synthase subunit hisF OS=Bordetella parapertussis GN=hisF PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.020e-49
Identity = 95/133 (71.43%), Postives = 110/133 (82.71%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV F N+ DAGDPVEIARRY+EQGADE+TFLDITA+ DG D  L  +E++ASQVFIPLTVGGGVR V D++ LLNAGADK+SIN+AAV NPE V  AA + GSQCIVVAIDA++ S  GE  RWE+FT
Sbjct:   27 GRVVKGVNFVNLTDAGDPVEIARRYNEQGADELTFLDITATSDGHDLILPIIEQVASQVFIPLTVGGGVRQVSDVQRLLNAGADKISINSAAVANPELVRAAADYHGSQCIVVAIDARRSSAEGEPARWEVFT 159          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_METFK (Imidazole glycerol phosphate synthase subunit hisF OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=hisF PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.169e-49
Identity = 100/134 (74.63%), Postives = 109/134 (81.34%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKGV F  +RDAGDPVEIARRYDEQGADE+TFLDITAS D R   L  +E++ASQVFIPLTVGGGVR V+DIR LLNAGADKVSINTAAV NP+ V +AA  FGSQCIVVAIDAK+V        WEIFT
Sbjct:   15 NGRVVKGVNFLELRDAGDPVEIARRYDEQGADELTFLDITASSDNRGLMLGIIEQVASQVFIPLTVGGGVREVEDIRRLLNAGADKVSINTAAVTNPQLVADAASRFGSQCIVVAIDAKQVG-----DHWEIFT 143          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_NITEU (Imidazole glycerol phosphate synthase subunit hisF OS=Nitrosomonas europaea GN=hisF PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.197e-48
Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPG-ETPRWEIFT 402
            +GRVVKGV F ++RDAGDPVEIAR Y+EQGADE+ FLDITAS + RD  LH VE++A+QVFIPLTVGGGVR  +D+R LLNAGADKVSINT+AV NP  + E+A H+GSQCIV+AIDA+++     E+PRWE+FT
Sbjct:   15 DGRVVKGVNFVSLRDAGDPVEIARSYNEQGADELVFLDITASSENRDLILHIVEKVAAQVFIPLTVGGGVRKAEDVRRLLNAGADKVSINTSAVLNPMLIKESADHYGSQCIVIAIDARQIPDANPESPRWEVFT 149          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_METS4 (Imidazole glycerol phosphate synthase subunit hisF OS=Methylobacterium sp. (strain 4-46) GN=hisF PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.668e-48
Identity = 96/134 (71.64%), Postives = 110/134 (82.09%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV+F  +RDAGDPVE A+ YD  GADE+ FLDITAS + R   L  V+R A   F+PLTVGGGVR+V+DIR LL AGADKVSINTAAV NP+FV EAA+ FG+QCIVVAIDAK+VSGPGE PRWEIFT
Sbjct:   14 DGRVVKGVQFLALRDAGDPVEAAKAYDAAGADELCFLDITASHEARGILLDVVQRTAEACFMPLTVGGGVRSVEDIRALLLAGADKVSINTAAVNNPDFVAEAAEKFGNQCIVVAIDAKRVSGPGEAPRWEIFT 147          
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_AZOSE6.349e-5076.69Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BORPE1.847e-4972.18Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BORBR1.847e-4972.18Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_AZOSB3.151e-4974.44Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_METNO4.116e-4972.39Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_NITMU5.375e-4971.64Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BORPA7.020e-4971.43Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_METFK9.169e-4974.63Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_NITEU1.197e-4868.15Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_METS42.668e-4871.64Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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