EY728581

Overview
NameEY728581
Unique NameEY728581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BRUAB (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella abortus GN=hisF PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.762e-48
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE AR YD  GADE+ FLDITAS D R+T    V R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG+QCIVVAIDAKKVSG GE  RWEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGNQCIVVAIDAKKVSGAGENDRWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BRUA2 (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella abortus (strain 2308) GN=hisF PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.762e-48
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE AR YD  GADE+ FLDITAS D R+T    V R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG+QCIVVAIDAKKVSG GE  RWEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGNQCIVVAIDAKKVSGAGENDRWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BRUA1 (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella abortus (strain S19) GN=hisF PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.762e-48
Identity = 98/134 (73.13%), Postives = 105/134 (78.36%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE AR YD  GADE+ FLDITAS D R+T    V R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG+QCIVVAIDAKKVSG GE  RWEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGNQCIVVAIDAKKVSGAGENDRWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_OCHA4 (Imidazole glycerol phosphate synthase subunit hisF OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=hisF PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.014e-47
Identity = 97/134 (72.39%), Postives = 104/134 (77.61%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE AR YD  GADE+ FLDITAS D R+T    + R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG QCIVVAIDAKKVSG GE  RWEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRETIFDVIARTAEQCFMPLTVGGGVRQVSDIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGDQCIVVAIDAKKVSGEGEADRWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_RHISN (Imidazole glycerol phosphate synthase subunit hisF OS=Rhizobium sp. (strain NGR234) GN=hisF PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.729e-47
Identity = 97/134 (72.39%), Postives = 105/134 (78.36%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE A+ YD  GADE+ FLDITAS D R+T    V R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG+QCIVVAIDAKKVS  GET RWEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAAKAYDAAGADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVSDIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGNQCIVVAIDAKKVSAAGETDRWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_RUTMC (Imidazole glycerol phosphate synthase subunit hisF OS=Ruthia magnifica subsp. Calyptogena magnifica GN=hisF PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.258e-47
Identity = 90/134 (67.16%), Postives = 111/134 (82.84%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            NGRVVKG KF +I+DAGDPVE+A+RYD + ADEITFLDITAS++GRDT +H VE +A QVFIPLTVGGG+R   D+R +LNAGADKV+IN+AA+FNP  + + ++ FGSQCIV+AIDAKKVS      +WEIFT
Sbjct:   15 NGRVVKGTKFVDIKDAGDPVEVAKRYDFECADEITFLDITASIEGRDTMIHMVEAIAEQVFIPLTVGGGIRKAVDVRAMLNAGADKVAINSAAIFNPNLINQLSEEFGSQCIVIAIDAKKVS----DNKWEIFT 144          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_GEOUR (Imidazole glycerol phosphate synthase subunit hisF OS=Geobacter uraniireducens (strain Rf4) GN=hisF PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.949e-47
Identity = 97/133 (72.93%), Postives = 109/133 (81.95%), Query Frame = 1
Query:    4 GRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            GRVVKGV+F  +RDAGDPVEIA  YD QGADE+TFLDITAS D RD  +  V R A +VF+PLTVGGGVRTV+DIR LLNAGADKVSINTAAV  PEFV EAA+ FGSQC VVAIDA++V  PGE  RWE++T
Sbjct:   15 GRVVKGVQFLELRDAGDPVEIAEIYDRQGADELTFLDITASSDARDIIIDVVRRTAERVFMPLTVGGGVRTVEDIRRLLNAGADKVSINTAAVHRPEFVKEAAERFGSQCTVVAIDARRV--PGE-DRWEVYT 144          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BRUME (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella melitensis GN=hisF PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.949e-47
Identity = 97/134 (72.39%), Postives = 104/134 (77.61%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE AR YD  GADE+ FLDITAS D R+T    V R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG+QCIVVAIDAKKVSG GE   WEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGNQCIVVAIDAKKVSGAGENDHWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_BRUMB (Imidazole glycerol phosphate synthase subunit hisF OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=hisF PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.949e-47
Identity = 97/134 (72.39%), Postives = 104/134 (77.61%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV F ++ DAGDPVE AR YD  GADE+ FLDITAS D R+T    V R A Q F+PLTVGGGVR V DIR LL AGADKVSINTAAV NPEFV EAA  FG+QCIVVAIDAKKVSG GE   WEIFT
Sbjct:   15 DGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRETIFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFGNQCIVVAIDAKKVSGAGENDHWEIFT 148          
BLAST of EY728581 vs. ExPASy Swiss-Prot
Match: HIS6_XANP2 (Imidazole glycerol phosphate synthase subunit hisF OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=hisF PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 5.031e-47
Identity = 96/134 (71.64%), Postives = 107/134 (79.85%), Query Frame = 1
Query:    1 NGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRTVQDIRNLLNAGADKVSINTAAVFNPEFVGEAAQHFGSQCIVVAIDAKKVSGPGETPRWEIFT 402
            +GRVVKGV+F ++RDAGDPVE AR YD  GADE+TFLDITAS + R T L  V R A Q F+PLTVGGGVRTV D+R LL+AGADKVSINTAAV    FVGEAA+ FG QCIVVAIDAK+VS  GE  RWEIFT
Sbjct:   14 DGRVVKGVQFVDLRDAGDPVEAARAYDLAGADELTFLDITASHENRGTILDVVRRTAEQCFMPLTVGGGVRTVDDVRTLLHAGADKVSINTAAVNRRAFVGEAAEKFGEQCIVVAIDAKRVSKEGEENRWEIFT 147          
The following BLAST results are available for this feature:
BLAST of EY728581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HIS6_BRUAB7.762e-4873.13Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUA27.762e-4873.13Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUA17.762e-4873.13Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_OCHA41.014e-4772.39Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_RHISN1.729e-4772.39Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_RUTMC2.258e-4767.16Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_GEOUR2.949e-4772.93Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUME2.949e-4772.39Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_BRUMB2.949e-4772.39Imidazole glycerol phosphate synthase subunit hisF... [more]
HIS6_XANP25.031e-4771.64Imidazole glycerol phosphate synthase subunit hisF... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728581 ID=EY728581; Name=EY728581; organism=Citrus sinensis; type=EST; length=403bp
AACGGTCGCGTGGTCAAGGGCGTCAAGTTCGAGAACATCCGTGACGCGGG
CGACCCGGTGGAAATCGCCCGTCGCTACGACGAACAGGGCGCTGACGAGA
TTACCTTTCTCGACATCACCGCCAGTGTCGATGGTCGCGACACCACGCTG
CATACCGTCGAGCGCATGGCCAGCCAGGTGTTTATCCCGCTGACCGTGGG
CGGTGGCGTGCGCACCGTGCAGGACATTCGCAACCTGCTGAATGCCGGCG
CGGACAAGGTATCGATCAACACTGCCGCCGTGTTCAACCCGGAGTTTGTC
GGCGAAGCCGCACAGCACTTCGGTTCGCAATGCATCGTCGTCGCCATCGA
CGCCAAGAAAGTCTCCGGTCCGGGCGAAACCCCGCGCTGGGAGATCTTCA
CCC
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