EY728566

Overview
NameEY728566
Unique NameEY728566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_KLEP3 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Klebsiella pneumoniae (strain 342) GN=aaeA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13
Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKIDE 245
            ++FYV  Y EETKL G+  G    +T +G ++ I+G V+SIA G+ +    + +  +A+V+    WVRLAQR+PVR+++D+
Sbjct:  189 NTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSSDSKGMASVDSNLEWVRLAQRVPVRIRLDQ 269          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_CITK8 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=aaeA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKIDE 245
            SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +      A  +A ++    WVRLAQR+PVR+++D+
Sbjct:  190 SFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDAKGMATIDSNLEWVRLAQRVPVRIRLDD 269          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOLU (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +    +    +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTSDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_SHIF8 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Shigella flexneri serotype 5b (strain 8401) GN=aaeA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_SHIDS (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=aaeA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOUT (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain UTI89 / UPEC) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOSM (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOSE (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain SE11) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOLI (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain K12) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOLC (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
The following BLAST results are available for this feature:
BLAST of EY728566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
AAEA_KLEP32.648e-1340.74p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_CITK83.459e-1341.25p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOLU1.314e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_SHIF82.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_SHIDS2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOUT2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOSM2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOSE2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOLI2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOLC2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-E12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728566 ID=EY728566; Name=EY728566; organism=Citrus sinensis; type=EST; length=881bp
CCAGCTCGTTCTACGTCGAAGGCTATTTCGAGGAAACCAAGCTGCCCGGC
ATCCACGAAGGCGCCCCCGTGACCGTGACGCTGATGGGTGACAACCGCCA
GATCCGCGGCCACGTCGAGAGCATCGCGCTGGGCATCGCCGACCGCGAAC
GCGGCACCGGCGCCAACCTGCTGGCCAACGTCAACCCGACCTTCAACTGG
GTGCGCCTGGCGCAGCGCATCCCGGTGCGCGTGAAGATCGACGAAATCCC
CACCGGCGTGCGCCTGGTGGCCGGCCAGACCGCCACCGTCGCGGTCGGCG
CCGCCGCCGCGCCCGCACAGACGCATACCGACGCGCGCCCACCGTCCTGA
ACACGCCTTTTTTGCGAACCCGCGAATCTCCTAGACAACGCCGAGCCGTA
GTCGCCATGATCACCACATGCTTCCTGCCGCTGATGCTGTCCGCCGCATT
GGCCGGATGCGCCGCCCGGGGCCCGGACTACCACGTGCCCGGCGGATCGG
CCGCCATCCGCCCATGAGCCCGCGGCCGGCCGCCGGGGCCGCGGCAAGGC
TCTTGTGAGCGCTAGGCGGGGGCGCGGCGGCGCCGGGCCCGCGCGCGCCA
GGCCGCCGCGACGCCACAGCGCGGGCCGGGCCTCACCGTGGCGTGGCGGG
CGCCCCGCGCGGTCCGGGGCGGGGCCCGCGGCGCGGGCGCGTCCCCGTCG
TGCCTGGGCGAGGGTGTTTCGGTGCAGCGGCGGGCCGCGGGGCGGCGCGG
CGCCCGGGCAGCGGCGGAGCGGCGCTGTCGCGGTTGGGTGCACGTAGAGG
CGCGCACGGCGCGGGCGAGACGTGGTGGTTCGCGTGTCGGGCGACTCCTC
GCACGGCGGCAAGCCCGGGCCGCCGCGAGCA
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