EY728566

Overview
NameEY728566
Unique NameEY728566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728566_ssr299 microsatellite EY728566_ssr299:299..310. BLAST: Citrus ESTs to SwissProt
Homology
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOL6 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O6 GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOL5 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOK1 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O1:K1 / APEC GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOHS (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O9:H4 (strain HS) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECODH (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain K12 / DH10B) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECOBW (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli (strain K12 / BW2952) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECO81 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O81 (strain ED1a) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECO7I (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECO5E (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  188 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 267
[Close]
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_ECO57 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Escherichia coli O157:H7 GN=aaeA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.242e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G+  G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  188 NSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 267
The following BLAST results are available for this feature:
BLAST of EY728566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
AAEA_ECOL62.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOL52.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOK12.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOHS2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECODH2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECOBW2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECO812.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECO7I2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECO5E2.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_ECO572.242e-1240.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-E12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728566 ID=EY728566; Name=EY728566; organism=Citrus sinensis; type=EST; length=881bp
CCAGCTCGTTCTACGTCGAAGGCTATTTCGAGGAAACCAAGCTGCCCGGC
ATCCACGAAGGCGCCCCCGTGACCGTGACGCTGATGGGTGACAACCGCCA
GATCCGCGGCCACGTCGAGAGCATCGCGCTGGGCATCGCCGACCGCGAAC
GCGGCACCGGCGCCAACCTGCTGGCCAACGTCAACCCGACCTTCAACTGG
GTGCGCCTGGCGCAGCGCATCCCGGTGCGCGTGAAGATCGACGAAATCCC
CACCGGCGTGCGCCTGGTGGCCGGCCAGACCGCCACCGTCGCGGTCGGCG
CCGCCGCCGCGCCCGCACAGACGCATACCGACGCGCGCCCACCGTCCTGA
ACACGCCTTTTTTGCGAACCCGCGAATCTCCTAGACAACGCCGAGCCGTA
GTCGCCATGATCACCACATGCTTCCTGCCGCTGATGCTGTCCGCCGCATT
GGCCGGATGCGCCGCCCGGGGCCCGGACTACCACGTGCCCGGCGGATCGG
CCGCCATCCGCCCATGAGCCCGCGGCCGGCCGCCGGGGCCGCGGCAAGGC
TCTTGTGAGCGCTAGGCGGGGGCGCGGCGGCGCCGGGCCCGCGCGCGCCA
GGCCGCCGCGACGCCACAGCGCGGGCCGGGCCTCACCGTGGCGTGGCGGG
CGCCCCGCGCGGTCCGGGGCGGGGCCCGCGGCGCGGGCGCGTCCCCGTCG
TGCCTGGGCGAGGGTGTTTCGGTGCAGCGGCGGGCCGCGGGGCGGCGCGG
CGCCCGGGCAGCGGCGGAGCGGCGCTGTCGCGGTTGGGTGCACGTAGAGG
CGCGCACGGCGCGGGCGAGACGTGGTGGTTCGCGTGTCGGGCGACTCCTC
GCACGGCGGCAAGCCCGGGCCGCCGCGAGCA
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