EY728566

Overview
NameEY728566
Unique NameEY728566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPS (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pseudotuberculosis GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPP (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pestis (strain Pestoides F) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPN (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPG (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPE (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pestis GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPB (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERPA (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_YERP3 (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +FY+  Y EETKL G+  G    +T +G NR + G V+SI+ G+ +      +  LA ++    WVRLAQR+PV++ +D
Sbjct:  190 TFYILAYLEETKLEGVKPGYRAEITPLGSNRILHGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRVPVKIHLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_SHISS (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Shigella sonnei (strain Ss046) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.453e-11
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 3
Query:    3 SSFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            +SFYV  Y EETKL G   G    +T +G N+ ++G V+S+A G+ +         +A ++    WVRLAQR+PVR+++D
Sbjct:  189 NSFYVLAYMEETKLEGGRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLD 268          
BLAST of EY728566 vs. ExPASy Swiss-Prot
Match: AAEA_PECCP (p-hydroxybenzoic acid efflux pump subunit aaeA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=aaeA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 3
Query:    6 SFYVEGYFEETKLPGIHEGAPVTVTLMGDNRQIRGHVESIALGIADRERGTGANLLANVNPTFNWVRLAQRIPVRVKID 242
            SFY+  Y EETKL G+  G    +T +G  +   G V+S+A G+ +         LANV+    WVRLAQR+PV++++D
Sbjct:  201 SFYLLAYMEETKLEGVRRGYRAEITPLGSEKIFYGTVDSVAAGVNNSSSSANNKGLANVDSNLEWVRLAQRVPVKIRLD 279          
The following BLAST results are available for this feature:
BLAST of EY728566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
AAEA_YERPS1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERPP1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERPN1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERPG1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERPE1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERPB1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERPA1.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_YERP31.453e-1139.24p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_SHISS1.453e-1140.00p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]
AAEA_PECCP1.898e-1140.51p-hydroxybenzoic acid efflux pump subunit aaeA OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-E12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728566 ID=EY728566; Name=EY728566; organism=Citrus sinensis; type=EST; length=881bp
CCAGCTCGTTCTACGTCGAAGGCTATTTCGAGGAAACCAAGCTGCCCGGC
ATCCACGAAGGCGCCCCCGTGACCGTGACGCTGATGGGTGACAACCGCCA
GATCCGCGGCCACGTCGAGAGCATCGCGCTGGGCATCGCCGACCGCGAAC
GCGGCACCGGCGCCAACCTGCTGGCCAACGTCAACCCGACCTTCAACTGG
GTGCGCCTGGCGCAGCGCATCCCGGTGCGCGTGAAGATCGACGAAATCCC
CACCGGCGTGCGCCTGGTGGCCGGCCAGACCGCCACCGTCGCGGTCGGCG
CCGCCGCCGCGCCCGCACAGACGCATACCGACGCGCGCCCACCGTCCTGA
ACACGCCTTTTTTGCGAACCCGCGAATCTCCTAGACAACGCCGAGCCGTA
GTCGCCATGATCACCACATGCTTCCTGCCGCTGATGCTGTCCGCCGCATT
GGCCGGATGCGCCGCCCGGGGCCCGGACTACCACGTGCCCGGCGGATCGG
CCGCCATCCGCCCATGAGCCCGCGGCCGGCCGCCGGGGCCGCGGCAAGGC
TCTTGTGAGCGCTAGGCGGGGGCGCGGCGGCGCCGGGCCCGCGCGCGCCA
GGCCGCCGCGACGCCACAGCGCGGGCCGGGCCTCACCGTGGCGTGGCGGG
CGCCCCGCGCGGTCCGGGGCGGGGCCCGCGGCGCGGGCGCGTCCCCGTCG
TGCCTGGGCGAGGGTGTTTCGGTGCAGCGGCGGGCCGCGGGGCGGCGCGG
CGCCCGGGCAGCGGCGGAGCGGCGCTGTCGCGGTTGGGTGCACGTAGAGG
CGCGCACGGCGCGGGCGAGACGTGGTGGTTCGCGTGTCGGGCGACTCCTC
GCACGGCGGCAAGCCCGGGCCGCCGCGAGCA
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