EY728556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP4M1_MOUSE (AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.188e-25 Identity = 74/231 (32.03%), Postives = 132/231 (57.14%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYITQEGVRS-PFS-----------SKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGV--NLPFRVLPTIK-ELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPK 663 E++D+GY Q S E+L+ +I E V S PFS ++ V ++ + R + +KNEVFLD+VE +++L++S GS+L+ DV G+I +K FL ++ +GL ++ + K S+L+ G I +D+V+FH VNL F S + + PP GE +M+Y++++ + LPFR+ P+++ + G R++V +K++ K AL + + +P+P+ Sbjct: 115 EVLDYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQNKVAPSSAASRPVLSSRSDQS--QKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEICIGLTEEFCVGK-SELRG----YGPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDLPSPLPFRLFPSVQWDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLPR 338
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP4M_DICDI (AP-4 complex subunit mu OS=Dictyostelium discoideum GN=apm4 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.319e-22 Identity = 59/176 (33.52%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 196 NEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLE--------KESQLK----------SRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQT 669 NE+++D+ E + +L SS G++LR ++TGKI MK +L G P L LGL+ + + E+++ S P+ + + +DD +FH+C + F T++F PP G+F L+KYRI+ PF V ++ R R ++ V I+S F K+ + + IPVPK T Sbjct: 228 NEIYIDLCERLTVLYSSNGTILRNEITGKIQMKSYLRGNPALSLGLSPEFTFKTIANRDESNENEIDNNNIGGVSNLSAPSSNTTSFIVDDCSFHECAG-SGFQPNNTINFKPPQGDFTLLKYRISNNNYTPFLVKTNLESTIRNRFDLVVTIRSNFSNKVVPNFIFVSIPVPKST 402
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M1_CHICK (AP-3 complex subunit mu-1 OS=Gallus gallus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20 Identity = 75/258 (29.07%), Postives = 118/258 (45.74%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRV--LPTIKELGRT-RMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 E++D G+P ILK I + V S S +P L + WRR G+ Y NE + D++E ++ ++ GS + ++ G I LSGMPDL L +N ++ LDDV+FH C+ R+ SE+ +SF+PPDG F L+ YR++ V +P V L + KE + R +V + K G + GVV+ + +PK + T G ++ L + KI+ Sbjct: 115 EMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLS---NIPWRRAGVKYTNNEAYFDVIEEIDAIIDKSGSTVFAEIQGVIDSCIKLSGMPDLSLSFMNPRL--------------------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHLISFKENSSSGRFDVTIGPKQNMGKTV--EGVVMTVHMPKAVLNMNLTATQGSYTFDPVTKVLAWDVGKIT 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M1_BOVIN (AP-3 complex subunit mu-1 OS=Bos taurus GN=AP3M1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.920e-20 Identity = 72/258 (27.91%), Postives = 116/258 (44.96%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTI---KELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 E++D G+P ILK I + GV S S +P L + WRR G+ Y NE + D+VE ++ ++ GS + ++ G I LSGMPDL L +N ++ LDDV+FH C+ R+ SE+ +SF+PPDG F L+ YR++ V +P V +I + R ++ + K G + G+ + + +PK + T G ++ L + KI+ Sbjct: 115 EMLDNGFPLATESNILKELIKPPTILRSGVNSITGSSNVGDTLPTGQLS---NIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPKQNMGKTI--EGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKIT 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M2_MOUSE (AP-3 complex subunit mu-2 OS=Mus musculus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19 Identity = 77/263 (29.28%), Postives = 117/263 (44.49%), Query Frame = 1 Query: 7 VRAEIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTI-----KELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 V E++D G+P ILK I + V + S +P L V V WRR G+ Y NE + D+VE ++ ++ GS + ++ G I L+GMPDL L +N ++ LDDV+FH CV R+ SE+ +SF+PPDG F L+ Y ++ V +P V +I LG R E+ V K G + GV++ +PK S + G ++ L + KI+ Sbjct: 112 VLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSV---VPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRL--------------------LDDVSFHPCVRFKRWESERILSFIPPDGNFRLLAYHVSAQNLVAIPVYVKHSISFRDSSSLG--RFEITVGPKQTMGKTI--EGVIVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKIN 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M1_PONAB (AP-3 complex subunit mu-1 OS=Pongo abelii GN=AP3M1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19 Identity = 71/258 (27.52%), Postives = 115/258 (44.57%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTI---KELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 E++D G+P ILK I + V S S +P L + WRR G+ Y NE + D+VE ++ ++ GS + ++ G I LSGMPDL L +N ++ LDDV+FH C+ R+ SE+ +SF+PPDG F L+ YR++ V +P V +I + R ++ + K G + G+ + + +PK + T G ++ L + KI+ Sbjct: 115 EMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLS---NIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPKQNMGKTI--EGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKIT 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M1_MOUSE (AP-3 complex subunit mu-1 OS=Mus musculus GN=Ap3m1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19 Identity = 71/258 (27.52%), Postives = 115/258 (44.57%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTI---KELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 E++D G+P ILK I + V S S +P L + WRR G+ Y NE + D+VE ++ ++ GS + ++ G I LSGMPDL L +N ++ LDDV+FH C+ R+ SE+ +SF+PPDG F L+ YR++ V +P V +I + R ++ + K G + G+ + + +PK + T G ++ L + KI+ Sbjct: 115 EMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLS---NIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPKQNMGKTI--EGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLAWDVGKIT 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M1_HUMAN (AP-3 complex subunit mu-1 OS=Homo sapiens GN=AP3M1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19 Identity = 71/258 (27.52%), Postives = 115/258 (44.57%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTI---KELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 E++D G+P ILK I + V S S +P L + WRR G+ Y NE + D+VE ++ ++ GS + ++ G I LSGMPDL L +N ++ LDDV+FH C+ R+ SE+ +SF+PPDG F L+ YR++ V +P V +I + R ++ + K G + G+ + + +PK + T G ++ L + KI+ Sbjct: 115 EMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLS---NIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPKQNMGKTI--EGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKIT 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M1_RAT (AP-3 complex subunit mu-1 OS=Rattus norvegicus GN=Ap3m1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.992e-19 Identity = 71/258 (27.52%), Postives = 114/258 (44.19%), Query Frame = 1 Query: 16 EIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTI---KELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 E++D G+P ILK I + V S S +P L + WRR G+ Y NE + D+VE ++ ++ GS + ++ G I LSGMPDL L +N ++ LDDV+FH C+ R+ SE+ +SF+PPDG F L+ YR++ V +P V I + R ++ + K G + G+ + + +PK + T G ++ L + KI+ Sbjct: 115 EMLDNGFPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLS---NIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHNISFKENSSCGRFDITIGPKQNMGKTI--EGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLAWDVGKIT 347
BLAST of EY728556 vs. ExPASy Swiss-Prot
Match: AP3M2_RAT (AP-3 complex subunit mu-2 OS=Rattus norvegicus GN=Ap3m2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.305e-18 Identity = 77/263 (29.28%), Postives = 116/263 (44.11%), Query Frame = 1 Query: 7 VRAEIMDFGYPQNLSPEILKLYIT-----QEGVRSPFSSKPTDRPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLG-LNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEG--VNLPFRVLPTIK-----ELGRTRMEVXVKIKSVFGAKMFALGVVIKIPVPKQTAKNSFXVTSGRAKYNASIDCLVLEDKKIS 756 V E++D G+P ILK I + V + S +P L V V WRR G+ Y NE + D+VE ++ ++ GS + ++ G I L+GMPDL L +N ++ LDDV+FH CV R+ SE+ +SF+PPDG F L+ Y ++ V +P V +I LG R E+ V K G + GV + +PK S + G ++ L + KI+ Sbjct: 112 VLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSV---VPWRRTGVKYTNNEAYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRL--------------------LDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSGSLG--RFEITVGPKQTMGKTI--EGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKIN 347 The following BLAST results are available for this feature:
BLAST of EY728556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728556 ID=EY728556; Name=EY728556; organism=Citrus sinensis; type=EST; length=920bpback to top |