EY728555

Overview
NameEY728555
Unique NameEY728555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.096e-35
Identity = 61/109 (55.96%), Postives = 83/109 (76.15%), Query Frame = 3
Query:  273 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVI 596
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WLGGQLFSAMV+R+PAH+FL EL I Y+++ +  V+
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVV 142          

HSP 2 Score: 44.669 bits (104), Expect = 2.096e-35
Identity = 21/34 (61.76%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  584 YVCDQHAALFTSTIMSKLLARPNVXLFNALAAED 685
            YV  +HAALF ST++SK+L  PNV LFNA   ED
Sbjct:  139 YVVVKHAALFISTVLSKVLQLPNVKLFNATCVED 172          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12
Identity = 33/99 (33.33%), Postives = 61/99 (61.62%), Query Frame = 3
Query:  300 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVI 596
            +++ ++SR +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W GG +F+ +V+ +    FL E+ I+Y+ +++  V+
Sbjct:    3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV 100          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 3
Query:  291 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGI--DYDEQDNMFVIS 599
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++   ++
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVA 109          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.973e-11
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 3
Query:  291 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGI--DYDEQDNMFVIS 599
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++   ++
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVA 109          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  288 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQD 581
            +F  + E+ V+R + + +  + I   DT+    G G +GL  A EL++   + + I+E++   GGG WLGG L + + VR+PA   LDEL + Y+E D
Sbjct:    5 EFADVSEAQVTRAIAKDWGNEFIDRVDTEVIIVGGGPSGLVTAKELAER-GVDVTIVEKNNYLGGGFWLGGFLMNKVTVRDPAQSVLDELDVPYEESD 101          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 34/100 (34.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  300 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVIS 599
            ++E  ++R +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE GI Y+E +  + ++
Sbjct:    2 LREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVA 100          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 3
Query:  288 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGI---DYDE 575
            K D IK   +SR +   YM D++ Y + D    G G +GL+  Y L++   +++A+ E+ +S GGG W GG +F+ +VV++     LDE GI    YDE
Sbjct:    2 KLDDIK---ISRAIVEGYMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDE 96          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.497e-11
Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  300 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVIS 599
            +K+ ++SR +   Y  D++   + D    GAG +G+   Y L+K    ++AI E+ +S GGG W GG  F+ +VV+E A   LDE  I Y+E +  + ++
Sbjct:    2 LKDVVISRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVA 100          
BLAST of EY728555 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  300 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVREPAHIFLDELGIDYDEQDNMFVIS 599
            ++E  +SR +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV+E A   LDE  I Y+E +  + ++
Sbjct:    2 LREVTISRAIIESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVA 100          
The following BLAST results are available for this feature:
BLAST of EY728555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
THI4_YEAST2.096e-3555.96Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]
THI4_THEMA6.781e-1233.33Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_HALSA1.973e-1135.24Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS31.973e-1135.24Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALWD4.395e-1135.71Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_PYRHO5.741e-1134.00Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_METTH5.741e-1137.37Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_PYRFU7.497e-1134.00Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRAB9.792e-1135.00Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-D11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728555 ID=EY728555; Name=EY728555; organism=Citrus sinensis; type=EST; length=903bp
CAAGCGTCCGCGGACGCGTGGGCACTGCTGCAAATCAAATTACTTCTCAT
TATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCAT
GGCAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCA
ATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTT
CTACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTC
TGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCA
TCAAAGAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGAC
ATGATCACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGC
TGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTG
CTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGA
CAGCTCTTCTCTGCCATGGTTGTGCGCGAACCAGCCCACATCTTCCTTGA
CGAGCTTGGCATCGACTACGATGAGCAAGACAATATGTTTGTGATCAGCA
TGCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCA
ACGTCNAGCTCTTTAATGCATTGGCAGCCGAGGACTTNGATAGTCAAGGC
GGCAGAGTTGGTGGGTGTGGTGACCACTGGGGCGTTGGTGGTCATGAATC
ACGATACACAATCTTGCATTGATTCCCATGTAATGAAACGAAAGTGGGTG
TGAACTCTGGTGGCCTGATGGGCCTTTGGGGCCCTGGAGTAAGAGGTTGA
AAGTTCGGAATATGGAGAAATGCCTGAATGAAGCCTGGACTTACTCTTCA
AAA
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