EY728552

Overview
NameEY728552
Unique NameEY728552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728552 vs. ExPASy Swiss-Prot
Match: FIXB_SALPK (Protein fixB OS=Salmonella paratyphi A (strain AKU_12601) GN=fixB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:    6 FVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFEAVPEL 218
            ++ ++  VG +  ++ P+LY+AVGISG IQH+ G   ++ I AINKD+ APIFQ AD+G+V D  + +P L
Sbjct:  237 WMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANGAQTIFAINKDKNAPIFQYADFGIVGDALKILPAL 307
[Close]
BLAST of EY728552 vs. ExPASy Swiss-Prot
Match: FIXB_SALPA (Protein fixB OS=Salmonella paratyphi A GN=fixB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:    6 FVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFEAVPEL 218
            ++ ++  VG +  ++ P+LY+AVGISG IQH+ G   ++ I AINKD+ APIFQ AD+G+V D  + +P L
Sbjct:  237 WMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANGAQTIFAINKDKNAPIFQYADFGIVGDALKILPAL 307
[Close]
BLAST of EY728552 vs. ExPASy Swiss-Prot
Match: FIXB_SALA4 (Protein fixB OS=Salmonella agona (strain SL483) GN=fixB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.179e-12
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:    6 FVPNDMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFEAVPEL 218
            ++ ++  VG +  ++ P+LY+AVGISG IQH+ G   ++ I AINKD+ APIFQ AD+G+V D  + +P L
Sbjct:  237 WMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANGAQTIFAINKDKNAPIFQYADFGIVGDALKILPAL 307
The following BLAST results are available for this feature:
BLAST of EY728552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
FIXB_SALPK2.179e-1246.48Protein fixB OS=Salmonella paratyphi A (strain AKU... [more]
FIXB_SALPA2.179e-1246.48Protein fixB OS=Salmonella paratyphi A GN=fixB PE=... [more]
FIXB_SALA42.179e-1246.48Protein fixB OS=Salmonella agona (strain SL483) GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-D08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728552 ID=EY728552; Name=EY728552; organism=Citrus sinensis; type=EST; length=866bp
CAGGTTTTGTACCGAACGACATGCAGGTCGGTCAGACCGGCAAAATCGTT
GCGCCACAGCTGTACATCGCCGTCGGTATCTCCGGCGCGATCCAGCATTT
GGCCGGTATGAAAGACTCCAAGGTGATCGTTGCGATCAACAAGGACGAAG
AAGCGCCGATCTTCCAGGTGGCTGATTACGGCCTGGTGGCAGACTTGTTC
GAAGCCGTACCCGAGTTGGAGAAGCTGGTCTAATCCAGCCGCTTCACTTA
TAAAGAGCCCGGTCTTTTGACCGGGCTTTTTTTTGCCCGGTAATTTTTGA
ATGGGAGAACCCTGCCATGGAATTGCGTCCCTGGACTGTACTGCTGGCCC
TGTCGCTGCTGCCGACGGTGTCGCTGGCGGCTGGCAAATGTGATCGCCTG
GTGATCACCGGCAGCCCGGACGCACCGCCTTATCTGTGGCGTGATCCCCG
GGACCCCACGCACTTGATCGGCGCCACCGCCGACATGTTGCAGCAAGTGG
CCAAGGACCTCGGAGTGAAAATCGACCTGCTGTACGGCGGCAAGCGCTCC
GTGGCTCTGGACGAAGTGCGCAGCGGACGCATGGACATCCTTGCCGATGC
GCCGTTGACCCTCGACGCTCTGGATGCCCTCGGATACATCCACCCGGCAT
TGGTGCAAACCGATTACCTGGTCTGGACCCGCAGGGATTCGGCCCTGGCC
CTACACCAGGCCAGCGACCTGCATGGGCACAAGGGCGCGGTGTCGGGAAG
GGCGCCCCTGANCCGTGACTTTGAAACCTTTGGCGGGTGAAGCACTGGCC
CTGCCGACGCCTGCCCACCTTGACCCCGGCGGTTCAAAGGCTGTTGTTGG
GCGAAATGGAGTAACC
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