EY728539

Overview
NameEY728539
Unique NameEY728539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728539 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.227e-21
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 3
Query:   60 VCVTGGSGCIGFWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVL-TAAKALGVKRXXXXXXXXXXXXXXKWPADKVKDEDCWTDEE--YCRQNEIW-YPLSKTLXXXXXXXXXXXXGLNVVVVNPETVMGPVIPPT 638
            V VTGG+G IG WLV  LLER Y VHATV++  ++++  HL  L  ADT L L++            + GC GVFH+A+P   +  +DP+N+++ P V+G ++++ + AKA  VKR              +       DE  W+D +  Y ++   W Y +SK L             ++ + + P  V+GP I  T
Sbjct:   20 VWVTGGAGFIGSWLVMRLLERGYNVHATVRDPENQKKVKHLLELPKADTNLTLWKADLAVEGSFDEAIQGCQGVFHVATPMDFES-KDPENEVIKPTVRGMLSIIESCAKANTVKR--LVFTSSAGTLDVQEDQKLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITST 213          

HSP 2 Score: 21.1718 bits (43), Expect = 7.227e-21
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 1
Query:  727 DVGWAHILVYENPSPGEGSVCTT 795
            D+  AHI +YE+P      +C++
Sbjct:  242 DLCEAHIFLYEHPKAEGRFICSS 264          
BLAST of EY728539 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.573e-19
Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 3
Query:   33 EKMSKEAEVVCVTGGSGCIGFWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVL-TAAKALGVKRXXXXXXXXXXXXXXKWPADKVKDEDCWTDEEYCRQNEI--W-YPLSKTLXXXXXXXXXXXXGLNVVVVNPETVMGPVIPPT 638
            E     +  VCVTG +G IG WLV  LLER YTV ATV++  + ++  HL  L  ADT L L++            + GC GVFHLA+    D V DP+N+++ P + G +N++ +  +A  VK+                    V DE   +D ++    ++  W Y +SK L             ++ + + P  V+GP I PT
Sbjct:   11 ETAPPSSTTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSV-DPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTVNVEEH--QKPVYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPT 213          
BLAST of EY728539 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18
Identity = 57/187 (30.48%), Postives = 97/187 (51.87%), Query Frame = 3
Query:   90 GFWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVLTAA-KALGVKRXXXXXXXXXXXXXXKWPADKVKDEDCWTDEEYCRQNEI--W-YPLSKTLXXXXXXXXXXXXGLNVVVVNPETVMGPVIPPT 638
            G WLV  L+E  Y V ATV++  + ++ + L  L GA ++L +++            + GCTGVFH+A+P   +  +DP+N+++ P +KG ++++ A  KA  V+R                    + DE CW+D E+CR+ ++  W Y +SKTL             ++V+ + P  V+GP + PT
Sbjct:    1 GSWLVMRLMEPGYMVRATVRDPENLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFES-KDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTLNVTE--DQKPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPT 184          
BLAST of EY728539 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 56/190 (29.47%), Postives = 94/190 (49.47%), Query Frame = 3
Query:   63 CVTGGSGCIGFWLVRLLLERRYTVHATVKNLSDERETAHLKALEGADTRLRLFQXXXXXXXXXXXXVTGCTGVFHLASPCIVDKVEDPQNQLLNPAVKGTVNVL-TAAKALGVKRXXXXXXXXXXXXXXKWPADKVKDEDCWTDEEYCRQNEIW---YPLSKTLXXXXXXXXXXXXGLNVVVVNPETVMG 620
            CV GG+G +   L++ LL+  Y V+ TV++  +E++ AHL+ L+     L++F+             +GC  +FH+A+P I  K EDP+  ++ PA++G +NVL +  K+  VKR                    V +E+ WTD E+  + + +   YP+SK L             +N+V V P  + G
Sbjct:   14 CVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGD-LKIFKADLTDEDSFESSFSGCEYIFHVATP-INFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAG 201          
The following BLAST results are available for this feature:
BLAST of EY728539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
DFRA_SOLLC7.227e-2132.99Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_ANTMA6.573e-1931.55Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_MEDSA1.912e-1830.48Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
BAN_ARATH3.053e-1629.47Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-C03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728539 ID=EY728539; Name=EY728539; organism=Citrus sinensis; type=EST; length=830bp
CACGCGTCCGCGAACAACAGCGGATACCGATAGAGAAAATGTCCAAAGAA
GCTGAGGTGGTTTGCGTCACCGGCGGCAGCGGCTGCATCGGCTTCTGGCT
GGTCCGTCTCCTTCTCGAACGCCGCTACACTGTTCACGCCACTGTCAAAA
ATCTCAGTGATGAAAGAGAAACAGCTCATCTCAAAGCGCTAGAAGGAGCT
GACACGCGTCTCCGTCTCTTCCAAATCGACCTCCTCGATTACGACGCCAT
CGCCGCCGCGGTCACCGGCTGTACTGGTGTCTTCCACTTGGCCTCACCTT
GCATTGTCGACAAAGTCGAAGATCCTCAGAACCAGCTTTTGAATCCCGCG
GTTAAAGGAACCGTTAACGTACTCACCGCAGCTAAGGCACTGGGAGTGAA
GCGCGTGGTCGTAACGTCATCGATTTCCTCTATAACTCCTAGCCCGAAGT
GGCCCGCTGATAAAGTCAAAGATGAGGATTGCTGGACCGATGAAGAGTAC
TGCAGGCAAAATGAAATATGGTATCCACTGTCGAAGACATTGGCTGAGAA
GGCAGCGTGGGAATTTGCAAAGGAGAAGGGTTTAAATGTGGTGGTGGTAA
ATCCTGAAACTGTGATGGGTCCTGTGATTCCACCAACACTCAATGCTAGT
ATGTTGATGCTTCTGCGGCTTCTCCAGGTTGCACTGATACATATGAGAAC
TTCTTTATGGGATCGGGTCATTTTAAGATGTGGGCTGGGCACATATTTTG
GTTTATGAGAACCCATCACCTGGTGAAGGCTCTGTGTGTACAACCAAATC
TCATTATGGTGATTTGCGGCCAGGGCGCAA
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