EY728532

Overview
NameEY728532
Unique NameEY728532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length135
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728532 vs. ExPASy Swiss-Prot
Match: AROB_DESRM (3-dehydroquinate synthase OS=Desulfotomaculum reducens (strain MI-1) GN=aroB PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = -1 
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP +V+ID ATL TLP REL AGLAEVIKYG+I D  F TWLE++
Sbjct:  160 QPQMVMIDVATLQTLPERELKAGLAEVIKYGVIWDGSFFTWLEKN 204
[Close]
BLAST of EY728532 vs. ExPASy Swiss-Prot
Match: AROB_PSYCK (3-dehydroquinate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=aroB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = -1 
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP +VL D +TL TLP RELSAGLAEVIKY LI D  FLTWLE +
Sbjct:  168 QPQMVLADMSTLKTLPARELSAGLAEVIKYALIMDAEFLTWLEHN 212
[Close]
BLAST of EY728532 vs. ExPASy Swiss-Prot
Match: AROB_PSYA2 (3-dehydroquinate synthase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=aroB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = -1 
Query:    1 QPNVVLIDTATLNTLPPRELSAGLAEVIKYGLICDEPFLTWLEEH 135
            QP +VL D +TL TLP RELSAGLAEVIKY LI D  FLTWLE +
Sbjct:  173 QPQMVLADMSTLKTLPARELSAGLAEVIKYALIMDADFLTWLEHN 217
The following BLAST results are available for this feature:
BLAST of EY728532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
AROB_DESRM7.420e-1168.893-dehydroquinate synthase OS=Desulfotomaculum redu... [more]
AROB_PSYCK9.690e-1171.113-dehydroquinate synthase OS=Psychrobacter cryohal... [more]
AROB_PSYA29.690e-1171.113-dehydroquinate synthase OS=Psychrobacter arcticu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-B06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728532 ID=EY728532; Name=EY728532; organism=Citrus sinensis; type=EST; length=135bp
ATGCTCTTCAAGCCAGGTCAGGAACGGCTCGTCGCAGATCAGGCCGTACT
TGATGACTTCCGCCAGGCCCGCCGACAGCTCGCGGGGCGGCAGGGTATTG
AGGGTGGCGGTGTCGATCAGCACCACATTCGGCTG
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