EY728531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_STAAC (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain COL) GN=clpC PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.369e-66 Identity = 112/218 (51.38%), Postives = 157/218 (72.02%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S +SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+ Sbjct: 378 SNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGA 589 HSP 2 Score: 46.595 bits (109), Expect = 1.369e-66 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811 +GGQLTE VRR+PY+V+LFDEIEK IL+ D +L D + +T Sbjct: 598 DGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRT 646
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_STAAB (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpC PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.369e-66 Identity = 112/218 (51.38%), Postives = 157/218 (72.02%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S +SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+ Sbjct: 378 SNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNTQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGA 589 HSP 2 Score: 46.595 bits (109), Expect = 1.369e-66 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811 +GGQLTE VRR+PY+V+LFDEIEK IL+ D +L D + +T Sbjct: 598 DGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRT 646
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain NCTC 8325) GN=clpC PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.369e-66 Identity = 112/218 (51.38%), Postives = 157/218 (72.02%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S +SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+ Sbjct: 378 SNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGA 589 HSP 2 Score: 46.595 bits (109), Expect = 1.369e-66 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811 +GGQLTE VRR+PY+V+LFDEIEK IL+ D +L D + +T Sbjct: 598 DGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRT 646
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain USA300) GN=clpC PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.369e-66 Identity = 112/218 (51.38%), Postives = 157/218 (72.02%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S +SDRFLPDKAIDLIDEA S+VRL+ P +E+E+E+ ++ EK+ AV Q+FE A LRD++ L+ Q ++ K + + ++E DI +++ WTGIP+ K++ ES++LL +E+TLH+RVIGQ +AV +IS+A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L+G+ Sbjct: 378 SNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTS------LSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGA 589 HSP 2 Score: 46.595 bits (109), Expect = 1.369e-66 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811 +GGQLTE VRR+PY+V+LFDEIEK IL+ D +L D + +T Sbjct: 598 DGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRT 646
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 4.702e-64 Identity = 113/217 (52.07%), Postives = 156/217 (71.89%), Query Frame = 1 Query: 19 LSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 ++DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+ Sbjct: 390 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGA 597 HSP 2 Score: 47.3654 bits (111), Expect = 4.702e-64 Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRLKTAR-EDCXLQNTLLY--------DIN--VDHGIEKGG 886 EGGQLTE VRR+P++VVLFDEIEK + + N LEDGRL + +NT+L DI+ V G KGG Sbjct: 606 EGGQLTEKVRRKPFSVVLFDEIEK----AHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGG 685
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 4.702e-64 Identity = 113/217 (52.07%), Postives = 156/217 (71.89%), Query Frame = 1 Query: 19 LSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 ++DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ + + + +GD+ VV EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+ Sbjct: 390 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQ--------RAEREKQWRSGDLD-VVAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGA 597 HSP 2 Score: 47.3654 bits (111), Expect = 4.702e-64 Identity = 37/84 (44.05%), Postives = 46/84 (54.76%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRLKTAR-EDCXLQNTLLY--------DIN--VDHGIEKGG 886 EGGQLTE VRR+P++VVLFDEIEK + + N LEDGRL + +NT+L DI+ V G KGG Sbjct: 606 EGGQLTEKVRRKPFSVVLFDEIEK----AHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGG 685
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 6.132e-64 Identity = 112/217 (51.61%), Postives = 156/217 (71.89%), Query Frame = 1 Query: 19 LSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVD---IQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 ++DRFLPDKAIDLIDEAG+R+R+R P + RE ++++ + +EK A+ QDFEKA LRDRE L AQ + + + +GD+ V+ EVD I ++ WTGIPV K++ E+ RLL+MEE LHKR+IGQ++AVKA+S+AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L G+ Sbjct: 390 INDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQ--------RAEREKQWRSGDLD-VIAEVDDEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGA 597 HSP 2 Score: 46.9802 bits (110), Expect = 6.132e-64 Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRLKTAR-EDCXLQNTLL 847 EGGQLTE VRR+P++VVLFDEIEK + + N LEDGRL + +NT+L Sbjct: 606 EGGQLTEKVRRKPFSVVLFDEIEK----AHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVL 662
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: HLYB_TREHY (Hemolysin B OS=Treponema hyodysenteriae GN=tlyB PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 7.207e-59 Identity = 103/218 (47.25%), Postives = 149/218 (68.35%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S + +R LPDKAIDLIDEAGSR RL + P+E ++LEK++ ++ ++K V Q+FE A ++RD L+ ++S K+ K E + + E DI+H++S T IP++++ ES RL+ MEE LH++V+GQ EA+ +IS+AIRR+R GLK RP+ SFIF GPTGVGK+ LAK L+ + FG +A+IR+DMSEFME+ VS+LIG+ Sbjct: 387 SKRYIFERHLPDKAIDLIDEAGSRARLLNMTRPQEFKDLEKKIEELNQQKKRVVESQNFEDAAKIRDEITSLQEELS------KKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSESKRLIGMEEELHQKVVGQKEAISSISKAIRRSRAGLKTSKRPLGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMSEFMEKFAVSRLIGA 598 HSP 2 Score: 43.1282 bits (100), Expect = 7.207e-59 Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRL 805 EGG LTE VRR+PY+++LFDEIEK + D +N LE+G+L Sbjct: 607 EGGGLTEKVRRKPYSLILFDEIEK----AHPDVTNILLQVLEEGQL 648
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.738e-57 Identity = 113/277 (40.79%), Postives = 160/277 (57.76%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK------NEAVRGQDFEKA----GELRDREMDLKAQISA-----------------------------------------LVDKGKEMSKAETEAGDVG--------PVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S +SDRFLPDKAIDL+DEA +++++ PEE E+++++ Q+ E+ A EK +L++ + L AQ A L + K++++AE + ++ VTE DI I+S WTGIPV K+ E+ +LL +EE LHKRV+GQDEAV A++ AI+R+R GL +PNRPIASFIF GPTGVGK+ELAKALAA+ F +EEA++R+DMSE+ME+H VS+LIG+ Sbjct: 378 SARYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDRKILQLEMERLSLQKETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKEEIEKVNIEIQQAERNYDLNRAAELKYGKLTELHKKLAEAEAKLREIQVGGRSLLRDEVTEADIAEIISKWTGIPVSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQRSRAGLADPNRPIASFIFLGPTGVGKTELAKALAAFMFDTEEALVRIDMSEYMEKHAVSRLIGA 654 HSP 2 Score: 49.6766 bits (117), Expect = 1.738e-57 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRLKTAR-EDCXLQNTLL 847 EGGQLTEA+RRRPY VVLFDEIEK + D N L+DGR+ ++ +NT++ Sbjct: 663 EGGQLTEAIRRRPYAVVLFDEIEK----AHPDVFNVFLQILDDGRVTDSQGRTVDFKNTII 719
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.544e-57 Identity = 118/278 (42.45%), Postives = 161/278 (57.91%), Query Frame = 1 Query: 7 SGNLLSDRFLPDKAIDLIDEAGSRV----------------RLRHAQLPEEARE-------------LEKEL----------------------------RQITKEKNE---AVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660 S ++DRFLPDKAIDL+DEA SR+ R+ ++ EA + LEKEL +Q+ + +NE A R +F++AGEL +I L K KE + +AG V VVT + HIVS WTGIPV+K+ E D+LL+ME+ + KRV+GQ EAV+A+S+A+RRAR GL++PNRPI SFIF GPTGVGK+EL KALA++ F + AM+R+DMSEFME+H+V++LIG+ Sbjct: 378 SNRYIADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLVRLEKELVGLEEESTEITAKWQAEKQKLGLAADLKKQLDEARNELAIAQRKGEFQRAGELA------YGKIPELEKKLKEAEAQDGKAGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEKHSVARLIGA 649 HSP 2 Score: 50.8322 bits (120), Expect = 6.544e-57 Identity = 31/61 (50.82%), Postives = 37/61 (60.66%), Query Frame = 2 Query: 683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKTAREDCXLQNTLL 847 EGG LTEAVRRRPY VVLFDEIEK +L+ D L DG+ +T +NTL+ Sbjct: 658 EGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTV----DFRNTLI 714 The following BLAST results are available for this feature:
BLAST of EY728531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728531 ID=EY728531; Name=EY728531; organism=Citrus sinensis; type=EST; length=904bpback to top |