EY728531

Overview
NameEY728531
Unique NameEY728531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.186e-56
Identity = 110/227 (48.46%), Postives = 153/227 (67.40%), Query Frame = 1
Query:    1 HASGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQIS---ALVDKGKEM---SKAETEAGDVGPV-VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            + S   ++DRFLPDKAIDLIDEAGSR R+   +     ++ E  +  ++K  N+    Q+ +    + +  +  + +     A+ D+  E+   S     AGD  P+ V   DI  + S W+GIPV++++ DE   L+ +E+ L  RV+GQDEAV AISRA++R+RVGLK+P+RPIA+ +F GPTGVGK+EL KALAA YFGSEE+M+RLDMSE+MERHTVSKLIGS
Sbjct:  489 YLSSRYIADRFLPDKAIDLIDEAGSRARIEAFR-----KKKEDAICILSKPPNDY--WQEIKTVQAMHEVVLSSRQKQDDGDAISDESGELVEESSLPPAAGDDEPILVGPDDIAAVASVWSGIPVQQITADERMLLMSLEDQLRGRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGS 708          

HSP 2 Score: 47.3654 bits (111), Expect = 4.186e-56
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEK 754
            EGG LTEA+RRRP+TVVLFDEIEK
Sbjct:  717 EGGMLTEAIRRRPFTVVLFDEIEK 740          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 4.188e-56
Identity = 115/286 (40.21%), Postives = 156/286 (54.55%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE-----------------------------LEKELRQITKEKN-------------------------------EAVRGQDFEKAGELRDREM--------DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   +SDRFLPDKAIDL+DE+ +R+++     PEE  E                             LEKEL  + +E+                                +A R  D  KA EL+  ++        +++  ++     GK + + E         VTEVDI  I+S WTGIPV K+   E  +LL ++E LH+RVIGQ+EAV A++ AI+R+R GL +P RPIASFIF GPTGVGK+ELAKALAAY F +E+AMIR+DMSE+ME+H VS+LIG+
Sbjct:  379 STRYISDRFLPDKAIDLVDESAARLKMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSVKEEIDQVNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREE---------VTEVDIAEIISKWTGIPVSKLVESEMQKLLNLDEELHQRVIGQEEAVSAVADAIQRSRAGLSDPKRPIASFIFLGPTGVGKTELAKALAAYLFDTEDAMIRIDMSEYMEKHAVSRLIGA 655          

HSP 2 Score: 52.373 bits (124), Expect = 4.188e-56
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRLKTAR-EDCXLQNTLL 847
            EGGQLTEAVRRRPY+V+LFDEIEK    +  D  N     L+DGR+  +R      +NT+L
Sbjct:  664 EGGQLTEAVRRRPYSVILFDEIEK----AHPDVFNVMLQILDDGRVTDSRGRTVDFKNTIL 720          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.189e-56
Identity = 115/279 (41.22%), Postives = 160/279 (57.35%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRL------------------------------------RHAQLPEEARELEKELR------------------------QITKEKNEAVRGQDFEKAGELRDREMD-LKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   ++DR LPDKAIDL+DEA +R+R+                                    R  +L +E  +LE+E+R                        ++  +  +A R  D  KA  LR  E+  L+ +++ L D+   M+ A+     V P+VTE DI  IVS WTGIPV K+   E ++LL++E+ LHKRV+GQDEA+ A++ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA  F +EE M+R+DMSE+ E+HTV++LIG+
Sbjct:  368 SHRYIADRKLPDKAIDLVDEAAARLRMALESSPESIDALNRRKLQLEIEREALKKETDAESKFRLGELEKEIADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEVRTQIEQAERAYDLNKAAPLRYGELPKLEQEVNELADR---MAGAQF----VRPMVTEEDIAAIVSRWTGIPVAKLMEGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARLIGA 639          

HSP 2 Score: 52.7582 bits (125), Expect = 4.189e-56
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811
            EGGQLTEAVRRRPY+V+LFDEIEK       +L+   D   L DG+ +T
Sbjct:  648 EGGQLTEAVRRRPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRT 696          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.461e-56
Identity = 112/274 (40.88%), Postives = 159/274 (58.03%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLK-----------------------AQISALVDKG----------------------------KEMSKAETEAG-DVGPVVTEV----DIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   ++DRFLPDKAIDL+DEA SR+R++    PEE  EL++ + Q+  E+    +  D      L   E+DL                        A +   +D+                             KE+++AE++ G    P+V EV    +I HIVS WTGIPV+K+   E D+LL+ME+ L K V+GQ +AV+A+SRA+RR+R GL++PNRPI SFIF GPTGVGK+EL KALA + F  E A++R+DMSE+ME+H+V++LIG+
Sbjct:  378 SNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQLDEARNELQIAQRKGEFQRAGELAYGVIPNLEKELAEAESQDGASANPMVQEVVTPDNIAHIVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARLIGA 651          

HSP 2 Score: 48.9062 bits (115), Expect = 5.461e-56
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811
            EGG LTE+VRRRPY VVLFDEIEK       +L+   D   L DG+ +T
Sbjct:  660 EGGALTESVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRT 708          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 7.127e-56
Identity = 108/220 (49.09%), Postives = 142/220 (64.55%), Query Frame = 1
Query:    1 HASGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            H S   + DRFLPDKAIDL+DE+GS+  L    +  E  ++ + +     +KNEA + +DFEKA   RD+           + K +E+ K E    D+ PV+TE DI+ IV   T IPV  +   E  +L+ + + L   VIGQDEAV  IS+AIRR+RVGL  PNRPI SF+F GPTGVGK+ELAK LA   FGS E+MIR DMSE+ME+H+V+KLIG+
Sbjct:  320 HLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPE--DINRRIADAESKKNEATKAEDFEKAAHFRDQ-----------ISKLRELQKQEVTDEDM-PVITEKDIEQIVEQKTQIPVGDLKEKEQTQLINLADDLKAHVIGQDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKLIGA 525          

HSP 2 Score: 43.1282 bits (100), Expect = 7.127e-56
Identity = 25/46 (54.35%), Postives = 29/46 (63.04%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSH-DASNLEDGRLKTAR 817
            E GQLTE VRR PY+++L DEIEK      H     LEDGRL  A+
Sbjct:  534 EAGQLTERVRRNPYSLILLDEIEKAHPDVMHMFLQILEDGRLTDAQ 579          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_PHOLL (Chaperone protein clpB OS=Photorhabdus luminescens subsp. laumondii GN=clpB PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.210e-55
Identity = 116/275 (42.18%), Postives = 158/275 (57.45%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPE--------------EARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE-----------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   +SDR LPDKAIDLIDEAG+ +R++    PE              E + L+KE    +K++ E +  +   K  E  + E + KA+ +AL   G +  KAE E           +GD+  +                                VT+ +I  I++ WTGIPV ++   E D+LL+ME+ LHKRVIGQDEAV AIS AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H VS+L+G+
Sbjct:  377 SHRYISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKRLEMLNEELLVKEREYSELEEEWKAEKAALT--GTQHIKAELENARISLEQARRSGDLAKMSEIQYGKIPGLEKQLAAATQAESKHMKLLRNKVTDAEIADILARWTGIPVARMLESEKDKLLRMEQELHKRVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFLFDSDDAMVRIDMSEFMEKHAVSRLVGA 649          

HSP 2 Score: 48.1358 bits (113), Expect = 1.210e-55
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811
            EGG LTEAVRRRPY+V+L DE+EK       IL+   D   L DG+ +T
Sbjct:  658 EGGYLTEAVRRRPYSVILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRT 706          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.577e-55
Identity = 111/275 (40.36%), Postives = 160/275 (58.18%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQI--------------TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVDKGKEMSKAETE-----------AGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   +SDR LPDKAIDLIDEAGS +R++    PE    LE+ + Q+              +K++ E +  +  +K  E  + E + KA+ ++L   G +  K E E            GD+  +                                VTE+++  +++ WTGIPV ++   E D+LL+ME+ LH+RVIGQDEAV+A+S AIRR+R GL +PNRPI SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H+VS+L+G+
Sbjct:  377 SHRYISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLT--GTQNIKTELEQAKITLEQARRVGDLARMSELQYGTIPELEKQLAAATALEGKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLKSERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGA 649          

HSP 2 Score: 48.1358 bits (113), Expect = 1.577e-55
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811
            EGG LTEAVRRRPY+V+L DE+EK       IL+   D   L DG+ +T
Sbjct:  658 EGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRT 706          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.681e-55
Identity = 112/273 (41.03%), Postives = 156/273 (57.14%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQIT-------KEKNEAVRGQ----------------DFEKAGELRDREMDLKAQISALVDKGKEMSKAETEAGDVGPV--------------------------------VTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   ++DR LPDKAIDLIDEA SR+R+     PEE   L++ L Q+        KE +EA R +                D E+  +    E+   AQI   +++ K+  +A    GD+  +                                VT+ +I  +VS WTGIPV K+   E ++LL+ME+ LH+RVIGQDEAV A+S A+RR+R GL +PNRP  SF+F GPTGVGK+EL KALA + F +EEA++R+DMSEFME+H+V++LIG+
Sbjct:  377 SHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMARIQYQTIPDLERSLQMVDQHGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGA 649          

HSP 2 Score: 45.8246 bits (107), Expect = 2.681e-55
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRL 805
            EGG LTEA+RR+PY+VVL DE+EK    +  D  N     LEDGRL
Sbjct:  658 EGGYLTEAIRRKPYSVVLLDEVEK----AHPDVFNILLQVLEDGRL 699          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 4.555e-55
Identity = 110/274 (40.15%), Postives = 155/274 (56.57%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL-----------------KAQISALVDKGKEMSKAETE------------AGD---------------------------VGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   ++DRFLPDKAIDL+DEA SR+R++    PEE  EL++ + Q+  E+    +  D      LR  E +L                 K ++    D  K + +A  E            AG+                           V  VVT  +I H+VS WTGIPV+K+   + ++LL+ME+ L K V+GQ EAV+A+S+A+RR+R GL++PNRPI SFIF GPTGVGK+EL K+LA + F  E AM+RLDMSE+ME+H+V++LIG+
Sbjct:  378 SNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRIIQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGA 651          

HSP 2 Score: 50.0618 bits (118), Expect = 4.555e-55
Identity = 28/49 (57.14%), Postives = 32/49 (65.31%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKL------ILMSSHDASNLEDGRLKT 811
            EGG LTEAVRRRPY VVLFDEIEK       +L+   D   L DG+ +T
Sbjct:  660 EGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRT 708          
BLAST of EY728531 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.939e-55
Identity = 113/279 (40.50%), Postives = 153/279 (54.84%), Query Frame = 1
Query:    7 SGNLLSDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARE-----------------------------LEKELR-------------------------------QITKEKNEAVRGQDFEKAGELRDREM-DLKAQISALVDKGKEMSKAETEAGDVGPVVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGS 660
            S   +SDRFLPDKAIDL+DEA +++++     PEE  E                             LEKEL                                Q+  E  +A R  D+ KA EL+  ++ DL+ Q+ AL  +  E   +      +   V E DI  I+S WTGIP+ K+   E ++LL +E+ LH RVIGQDEAV A++ AI+R+R GL +PNRP ASFIF GPTGVGK+ELAKALA   F +EEA++R+DMSE+ME+H VS+L+G+
Sbjct:  379 SNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSL--LREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGA 655          

HSP 2 Score: 51.6026 bits (122), Expect = 5.939e-55
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 2
Query:  683 EGGQLTEAVRRRPYTVVLFDEIEKLILMSSHDASN-----LEDGRLKTAR 817
            EGGQLTEA+RRRPY+V+LFDEIEK    +  D  N     L+DGRL  A+
Sbjct:  664 EGGQLTEAIRRRPYSVILFDEIEK----AHGDVFNVMLQILDDGRLTDAQ 709          
The following BLAST results are available for this feature:
BLAST of EY728531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
ERD1_ARATH4.186e-5648.46ERD1 protein, chloroplastic OS=Arabidopsis thalian... [more]
CLPB1_SYNE74.188e-5640.21Chaperone protein clpB 1 OS=Synechococcus elongatu... [more]
CLPB_MEIRU4.189e-5641.22Chaperone protein clpB OS=Meiothermus ruber GN=clp... [more]
CLPB_RHIME5.461e-5640.88Chaperone protein clpB OS=Rhizobium meliloti GN=cl... [more]
CLPE_LACLM7.127e-5649.09ATP-dependent Clp protease ATP-binding subunit clp... [more]
CLPB_PHOLL1.210e-5542.18Chaperone protein clpB OS=Photorhabdus luminescens... [more]
CLPB_YERPE1.577e-5540.36Chaperone protein clpB OS=Yersinia pestis GN=clpB ... [more]
CLPB_PSEAE2.681e-5541.03Chaperone protein clpB OS=Pseudomonas aeruginosa G... [more]
CLPB_AGRT54.555e-5540.15Chaperone protein clpB OS=Agrobacterium tumefacien... [more]
CLPB2_SYNY35.939e-5540.50Chaperone protein clpB 2 OS=Synechocystis sp. (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-B05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728531 ID=EY728531; Name=EY728531; organism=Citrus sinensis; type=EST; length=904bp
CACGCGTCCGGCAATCTTCTCAGTGACCGTTTTCTCCCTGATAAAGCTAT
TGATTTGATTGATGAAGCTGGTTCTCGGGTTCGTCTTCGTCATGCACAGC
TCCCCGAGGAAGCTAGAGAGCTTGAAAAAGAGCTCAGGCAGATAACTAAG
GAGAAGAATGAGGCTGTTCGTGGCCAAGACTTTGAAAAGGCTGGAGAGTT
ACGTGATAGAGAAATGGACCTTAAGGCTCAGATATCTGCTCTTGTCGATA
AAGGCAAAGAGATGAGCAAGGCAGAGACTGAAGCAGGGGATGTTGGTCCT
GTTGTGACTGAAGTGGACATTCAACACATTGTCTCAGCTTGGACGGGCAT
TCCGGTTGAAAAAGTCTCGACTGATGAATCTGATCGCCTCCTCAAGATGG
AAGAGACCCTTCACAAGAGAGTTATTGGTCAGGACGAAGCTGTCAAAGCT
ATTAGTCGTGCTATCCGGCGTGCACGTGTTGGACTCAAAAACCCCAATCG
ACCAATTGCTAGTTTCATCTTTTCTGGTCCAACTGGTGTCGGGAAGTCTG
AACTGGCCAAAGCACTGGCTGCCTATTACTTTGGCTCAGAGGAGGCCATG
ATCAGGCTTGATATGAGTGAGTTCATGGAAAGACACACTGTNTCCAAGCT
CATTGGTTCACACCTGGTTATGTTGGTTACCTGAGGGTGGTCAGCTGACT
GAGGCTGTTCGCCGTCGTCCTTATACTGTTGTACTCTTTGATGAGATTGA
AAAGCTCATCCTGATGTCTTCACATGATGCTTCAAATCTCGAGGATGGAA
GATTGAAGACAGCAAGGGAAGACTGTANACTTCAGAATACTCTTCTATAT
GACATCAATGTGGACCATGGTATTGAGAAGGGGGGAGCCGCATTGGTTTG
ATTT
back to top