EY728521

Overview
NameEY728521
Unique NameEY728521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:158..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.649e-17
Identity = 44/143 (30.77%), Postives = 68/143 (47.55%), Query Frame = 2
Query:  191 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGG 601
            E  V++ + +      +   D D    GAG +GL+ A  L++N  ++  ++E+ +S GGG W  G  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ G
Sbjct:    9 EVAVTKSILKSTFNMWMDIIDVDVVIIGAGPSGLTAAKYLAQN-GVKTVVLERHLSFGGGTWGGGMGFPNIVVEKPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAG 145          

HSP 2 Score: 46.9802 bits (110), Expect = 4.649e-17
Identity = 24/69 (34.78%), Postives = 41/69 (59.42%), Query Frame = 3
Query:  654 MDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +DP  + AK V+ S GHD     T +++ K + +  EVPG K++     E+++ R TR++ PG+ V G+
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGM 226          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.042e-17
Identity = 39/140 (27.86%), Postives = 72/140 (51.43%), Query Frame = 2
Query:  164 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 583
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG      LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFR 140          

HSP 2 Score: 43.8986 bits (102), Expect = 6.042e-17
Identity = 26/89 (29.21%), Postives = 41/89 (46.07%), Query Frame = 3
Query:  594 LVGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            + GV   W    M       +DP  + AK VV + GHD    A  S+++  + ++  +PG ++     AE   V  T  V PG+ V G+
Sbjct:  146 VAGVAVEWTATQM---AGLHVDPVFISAKAVVDATGHDAEVVAVASRKIPELGIV--IPGERSAYSEMAEKLTVEQTGVVAPGLYVAGM 229          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.863e-17
Identity = 43/141 (30.50%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  185 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-GRVGG 601
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W  G +F  +VV++ A   LD  GI Y   ++ Y V K         ++       V+ FN    ED++++G GR+GG
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAKSVEAVAK--LTAAACDAGVEFFNLTTVEDVMIRGDGRIGG 140          

HSP 2 Score: 36.5798 bits (83), Expect = 7.863e-17
Identity = 26/87 (29.89%), Postives = 38/87 (43.68%), Query Frame = 3
Query:  600 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            G+V NW  V M       +DP  M     V + GHD        K+  ++     V G   +    AE  I+  T++V PG+ VTG+
Sbjct:  140 GLVVNWTPVDM---AGLHVDPLTMACTCTVDATGHDAMIARMVEKKGGALT----VKGESFMWAERAESQILAHTKEVFPGLFVTGM 219          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 2.244e-16
Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  185 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVKGG 589
            + E  ++R +   Y+   +   D D    GAG A L  A  L++  ++++ + E+ +S GGG W  G +F  +VV+K A   LDE  I Y E ++ Y V       +  +++KL A       +L N V+ ED++++ G
Sbjct:    3 LDEVKITRAIVESYLESFLKCTDVDVALVGAGPANLVAAKRLAE-ADVRVVLFEKRLSVGGGLWGGGMMFPRIVVQKEACRILDEYDIWYREFEEGYYVAD-----SIEVVAKLTAGAIDAGAELINLVSVEDVMIREG 135          

HSP 2 Score: 44.669 bits (104), Expect = 2.244e-16
Identity = 29/90 (32.22%), Postives = 43/90 (47.78%), Query Frame = 3
Query:  594 LVGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEE-VPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +VG+V NW    M       +DP  + A+VV+   GHD        K++    + E  V G K +     E  +V  TR+V PG+IV G+
Sbjct:  138 IVGLVINWTAADM---AGIHVDPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAALGEKIVVDATREVYPGLIVAGM 224          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.244e-16
Identity = 43/143 (30.07%), Postives = 67/143 (46.85%), Query Frame = 2
Query:  191 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGG 601
            E  V++ + +      +   D D    GAG +GL+ A  L++   ++  ++E+ +S GGG W  G  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ G
Sbjct:    9 EVAVTKSILKSTFNMWMDVIDVDVVIVGAGPSGLTAAKYLAQK-GVKTVVLERHLSFGGGTWGGGMGFPNIVVEKPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAG 145          

HSP 2 Score: 46.9802 bits (110), Expect = 2.244e-16
Identity = 24/69 (34.78%), Postives = 41/69 (59.42%), Query Frame = 3
Query:  654 MDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +DP  + AK V+ S GHD     T +++ K + +  EVPG K++     E+++ R TR++ PG+ V G+
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGM 226          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.791e-16
Identity = 43/143 (30.07%), Postives = 66/143 (46.15%), Query Frame = 2
Query:  191 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGG 601
            E  V++ + +      +   D D    GAG +GL+ A  L++    +  ++E+ +S GGG W  G  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ G
Sbjct:    9 EVAVTKSILKSTFNMWMDIIDVDVVIVGAGPSGLTAAKYLAQK-GFKTVVLERHLSFGGGTWGGGMGFPNIVVEKPADDILREAGIKLDEVDG-----EEELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAG 145          

HSP 2 Score: 46.9802 bits (110), Expect = 3.791e-16
Identity = 24/69 (34.78%), Postives = 41/69 (59.42%), Query Frame = 3
Query:  654 MDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +DP  + AK V+ S GHD     T +++ K + +  EVPG K++     E+++ R TR++ PG+ V G+
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGM 226          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.217e-16
Identity = 45/139 (32.37%), Postives = 82/139 (58.99%), Query Frame = 2
Query:  185 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGG 601
            +++ ++SR +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W  G +F+ +V+ K    FL E+ I+Y+ ++ ++V+  +  F S ++ +   +    +FN V+ ED+ V+ GRV G
Sbjct:    3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV-DSVHFASGLLYR-ATKAGAIVFNNVSVEDVAVQNGRVCG 138          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 6.372e-16
Identity = 43/148 (29.05%), Postives = 76/148 (51.35%), Query Frame = 2
Query:  173 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDY----DEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGG 601
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A EL++   +Q+ ++E++   GGG WL G L + + VR PA   LDEL +D+    D +  YV     A    + + K       K+ N     D++++   RVGG
Sbjct:    9 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELAER-GVQVMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQQVLDELEVDHKRSKDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGG 152          

HSP 2 Score: 38.891 bits (89), Expect = 6.372e-16
Identity = 28/111 (25.23%), Postives = 47/111 (42.34%), Query Frame = 3
Query:  600 GVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMI------------------------EEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            G+V NW  V       +C+DP  +EA +V+ + GHD    A   K+L    ++                         + PG  ++ +  +EDA+V  T     G++VTG+
Sbjct:  152 GIVMNWTPVHALPREITCVDPIAVEADLVIDATGHD----AMAVKKLDERGVLNAPGLEDEASGMDQTDDDTYGAPGHDSPGHDSMWVGESEDAVVEHTGLAHDGLVVTGM 258          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 8.319e-16
Identity = 38/137 (27.74%), Postives = 68/137 (49.64%), Query Frame = 2
Query:  173 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 583
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ I   E +  V +  +A F + + +  +     K+ + V  +D+I +
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNIRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFR 138          

HSP 2 Score: 42.743 bits (99), Expect = 8.319e-16
Identity = 25/89 (28.09%), Postives = 42/89 (47.19%), Query Frame = 3
Query:  594 LVGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            + GV   W    M       +DP  + AK VV + GHD    +  ++++  + ++  +PG K+     AE+  V  T KV  G+  TG+
Sbjct:  144 VAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGM 227          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.325e-16
Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 2
Query:  185 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK 583
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +S   + ++       + KL+A       ++FN V+ ED++++
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIR 133          

HSP 2 Score: 35.8094 bits (81), Expect = 8.325e-16
Identity = 23/90 (25.56%), Postives = 45/90 (50.00%), Query Frame = 3
Query:  594 LVGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIE-EVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            + G+V NW  V+     +  +DP ++  K+V+   GH+     T  +++ +  + E  + G K +     E   V  T+++ PG+IV G+
Sbjct:  138 VTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLLGEKPMWSEVGERLAVNATQEIYPGLIVAGM 224          
The following BLAST results are available for this feature:
BLAST of EY728521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
THI4_METM74.649e-1730.77Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULAC6.042e-1727.86Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METMJ7.863e-1730.50Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_METTP2.244e-1629.50Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METM52.244e-1630.07Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM63.791e-1630.07Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_THEMA4.217e-1632.37Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_HALMA6.372e-1629.05Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_SULSO8.319e-1627.74Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METAC8.325e-1630.15Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728521 ID=EY728521; Name=EY728521; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATAAGCTCTTTGACT
CATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCC
ATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCC
TCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTG
TTTCTCGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTATGCT
GACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGC
TTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGT
CTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCC
ATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGA
CTACGATGAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGTTCA
CCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTT
AATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGG
GTGTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCT
TGCATGGATCCCAATGTAATGGAAGCGAAGGTGGTTGTGAGCTCTTGTGG
CCATGATGGGCCTTTTGGGGCCACTGGAAGTAAGAGGTTGAAGAGTATCN
GAATGATTGAGGAAGTGCCTGGAATAAAGGCACTGGACATGAACTCTGCA
GAAGATGCTATTGTTAGGCTAACCAGGAAGGTTGTGCCTGGTATTATAGT
TACCGGCCTGGAAG
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