EY728521

Overview
NameEY728521
Unique NameEY728521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:158..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.258e-14
Identity = 37/137 (27.01%), Postives = 68/137 (49.64%), Query Frame = 2
Query:  173 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 583
            K   + E  +SR + +  M D   + ++D    GAG +GLS AY L+K   ++  + E+ +S GGG      LF  +++ KPA   L E+ +   E +  V +  +A F + + +  +     K+ + V  +D+I +
Sbjct:    4 KIKQVDEVKISRYIIKETMEDWYQFVESDVVIVGAGPSGLSAAYYLAK-AGLKTLVFERRLSFGGGIGGGAMLFHKLIIEKPADEILREVNVRLKEVEEGVYVVDSAEFMAKLATAAI-DAGAKIIHGVTVDDVIFR 138          

HSP 2 Score: 37.7354 bits (86), Expect = 3.258e-14
Identity = 23/89 (25.84%), Postives = 40/89 (44.94%), Query Frame = 3
Query:  594 LVGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            + GV   W    M       +DP  + AK VV + GHD    +  ++++  + ++  + G K+     AE+  V  T KV  G+   G+
Sbjct:  144 VAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IAGEKSAYSERAEELTVINTGKVAEGLYAAGM 227          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METJA (Putative thiazole biosynthetic enzyme OS=Methanocaldococcus jannaschii GN=MJ0601 PE=3 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 5.502e-14
Identity = 37/118 (31.36%), Postives = 59/118 (50.00%), Query Frame = 2
Query:  251 DTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGID-YDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGG 601
            + D    GAG +GL+CA  L+K    ++ ++E+ ++ GGG W  G  F  +VV +PA   L E+GI   D  D Y V     +     ++ + A    K+   +  EDLI++   V G
Sbjct:   32 EADVVIVGAGPSGLTCARYLAKE-GFKVVVLERHLAFGGGTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDA--GAKILTGIVVEDLILREDGVAG 146          

HSP 2 Score: 40.817 bits (94), Expect = 5.502e-14
Identity = 23/69 (33.33%), Postives = 39/69 (56.52%), Query Frame = 3
Query:  654 MDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +DP  + +KVVV + GH+        K+ K   +  +VPG K++     E+A++R TR+V P + V G+
Sbjct:  161 IDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGM 226          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METVS (Putative thiazole biosynthetic enzyme OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 5.504e-14
Identity = 38/143 (26.57%), Postives = 63/143 (44.06%), Query Frame = 2
Query:  191 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGG 601
            E  V++ + +      +   + D    G G +GL+ A  L++   ++  ++E+ +S GGG W  G  F  +VV KPA   L   GI     D         LFT+    + +KL         K+   +  EDLI+K  ++ G
Sbjct:    9 EVAVTKSIIKSSFEMWMDLIEVDVVIVGGGPSGLTAAKYLAEK-GVKTLVLERHLSFGGGTWGGGMGFPNIVVEKPADEILRSAGIKLKSVDG-----EPELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKISG 145          

HSP 2 Score: 48.9062 bits (115), Expect = 5.504e-14
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 3
Query:  654 MDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +DP  + AK V+ S GHD    +T +++ K + +  EVPG K++     E+++ R TR++ PG+ V G+
Sbjct:  160 VDPITISAKYVIDSTGHDASVVSTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLFVCGM 226          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 3.435e-13
Identity = 30/117 (25.64%), Postives = 58/117 (49.57%), Query Frame = 2
Query:  251 DTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGG 601
            + D    G G +GL+    L+ +  +++ I+E+ +S GGG W  G     + V+ PA   L E+GI  +E +  + +  +    + + +  +     K+   +  ED+I+K G+V G
Sbjct:   32 EVDVVIVGGGPSGLTAGRYLA-DAGVKVLILERHLSFGGGTWGGGMGCPYITVQSPADEILSEVGIKLEEGEDGLFVADSVEVPAKLGTGAI-DAGAKVLTGIVVEDVILKEGKVSG 146          

HSP 2 Score: 45.0542 bits (105), Expect = 3.435e-13
Identity = 19/69 (27.54%), Postives = 42/69 (60.87%), Query Frame = 3
Query:  654 MDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            +DP  + AK V+ + GHD     T +++ + + ++  +PG K+L  +  E+ +++ T+++ PG+ V G+
Sbjct:  161 IDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGM 227          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 7.522e-13
Identity = 38/144 (26.39%), Postives = 70/144 (48.61%), Query Frame = 2
Query:  161 LNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLAR---PNVKLFNAVAAEDLIVK 583
            +N  + D IK   ++R + +    D + ++  D    GAG +GL+ AY  +K   ++  + E+ +S GGG      LF  +V+  PA   L E+G+   + +  V +    + +S  M+KL A       K+ + V  +D+I +
Sbjct:    1 MNIKQVDEIK---ITRYILKATFEDWMDFSVNDVVIVGAGPSGLAAAYYSAK-AGLKTTVFERRLSFGGGIGGGAMLFHKIVIESPADEILREIGVKLQKFEEGVYV----VDSSEFMAKLAAATIDAGAKIIHGVTVDDVIFR 136          

HSP 2 Score: 42.3578 bits (98), Expect = 7.522e-13
Identity = 24/89 (26.97%), Postives = 41/89 (46.07%), Query Frame = 3
Query:  594 LVGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGSKRLKSIXMIEEVPGIKALDMNSAEDAIVRLTRKVVPGIIVTGL 860
            + GV   W    M       +DP  + AK VV + GHD    +  S+++  + ++  +PG K+     AE   V  + +V PG+   G+
Sbjct:  142 VTGVAVEWTATQM---ASLHVDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGM 225          
BLAST of EY728521 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.100e-11
Identity = 39/139 (28.06%), Postives = 70/139 (50.36%), Query Frame = 2
Query:  185 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGG 601
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W  G +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ G
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISG 138          
The following BLAST results are available for this feature:
BLAST of EY728521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
THI4_SULIN3.258e-1427.01Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METJA5.502e-1431.36Putative thiazole biosynthetic enzyme OS=Methanoca... [more]
THI4_METVS5.504e-1426.57Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_META33.435e-1325.64Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METS57.522e-1326.39Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_FERNB9.100e-1128.06Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728521 ID=EY728521; Name=EY728521; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATAAGCTCTTTGACT
CATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCC
ATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCC
TCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTG
TTTCTCGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTATGCT
GACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGC
TTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGT
CTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTCTGCC
ATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGA
CTACGATGAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTGTTCA
CCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTT
AATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGG
GTGTGGTGACCAACTGGGCGTTGGTGTCAATGAATCACGATACACAGTCT
TGCATGGATCCCAATGTAATGGAAGCGAAGGTGGTTGTGAGCTCTTGTGG
CCATGATGGGCCTTTTGGGGCCACTGGAAGTAAGAGGTTGAAGAGTATCN
GAATGATTGAGGAAGTGCCTGGAATAAAGGCACTGGACATGAACTCTGCA
GAAGATGCTATTGTTAGGCTAACCAGGAAGGTTGTGCCTGGTATTATAGT
TACCGGCCTGGAAG
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