EY728512

Overview
NameEY728512
Unique NameEY728512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728512 vs. ExPASy Swiss-Prot
Match: ILVE_ECOL6 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O6 GN=ilvE PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.102e-14
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 3
Query:  267 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXXRRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQK 581
            + I LD +GY+SE    N+F VK G + TP      LPGITR                + +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQ 287          
BLAST of EY728512 vs. ExPASy Swiss-Prot
Match: ILVE_ECO57 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O157:H7 GN=ilvE PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.102e-14
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 3
Query:  267 DAIMLDKDGYVSETNATNIFLVKKGRVLTP-HADYCLPGITRATXXXXXXXXXXXXXXRRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQK 581
            + I LD +GY+SE    N+F VK G + TP      LPGITR                + +S    + ADEV+ +GT  EITPV  +DG  VG+G+ GPVT+RIQ+
Sbjct:  182 EGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQ 287          
BLAST of EY728512 vs. ExPASy Swiss-Prot
Match: DAAA_STAHA (D-alanine aminotransferase OS=Staphylococcus haemolyticus GN=dat PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 3
Query:  258 NAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXXRRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQK 581
            NAG+AI   +   V+E  ++N++ +K G + T P  +Y L GITR                   ++     ADEV  + T  E+TPVVKIDG  VGDGKVGPVT+++Q+
Sbjct:  164 NAGEAIQ-HRGETVTEGASSNVYAIKDGAIYTHPVNNYILNGITRKVIKWISEDEDIPFKEETFTVEFLKNADEVIVSSTSAEVTPVVKIDGEQVGDGKVGPVTRQLQE 271          
BLAST of EY728512 vs. ExPASy Swiss-Prot
Match: DAAA_BACLI (D-alanine aminotransferase OS=Bacillus licheniformis GN=dat PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.519e-12
Identity = 55/200 (27.50%), Postives = 91/200 (45.50%), Query Frame = 3
Query:   45 KVTSGMSPAFNLYGC------TLIVLPEWKTPVYDNTHGVNLVTATTRRNSPNNLDSKXXXXXXXXXXXAKIEGNNANAGDAIMLDKDGYVSETNATNIFLVKKGRVLT-PHADYCLPGITRATXXXXXXXXXXXXXXRRISLSEFHTADEVWTTGTMGEITPVVKIDGRIVGDGKVGPVTQRIQKFTKRDRRVRSANTI 623
            +VT G +P  + YG       T    P  K P  +  +GV+ +TA   R    ++ S             K +   A+A +AI++ +DG V+E  ++N+++ K+  + T P     L GITR                + ++  E   ADEV+ T T  E+ PV  IDG+ +G G  GP+T+ +Q   +      +A T+
Sbjct:   90 QVTRGKAPRKHQYGAGLTPQVTAYTFPIQK-PEKEQQNGVSAITADDMRWLRCDIKS----LNLLYNVMIKQKAQEASAFEAILI-RDGLVTEGTSSNVYVAKQNVIYTHPVTTLILNGITRMKVLQLCEENGLNYEEKAVTKDELLNADEVFITSTTAEVIPVTSIDGQTIGSGAPGPLTKNVQTALQNSILSETAKTV 283          
The following BLAST results are available for this feature:
BLAST of EY728512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ILVE_ECOL69.102e-1441.51Branched-chain-amino-acid aminotransferase OS=Esch... [more]
ILVE_ECO579.102e-1441.51Branched-chain-amino-acid aminotransferase OS=Esch... [more]
DAAA_STAHA1.717e-1239.45D-alanine aminotransferase OS=Staphylococcus haemo... [more]
DAAA_BACLI8.519e-1227.50D-alanine aminotransferase OS=Bacillus licheniform... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-H04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728512 ID=EY728512; Name=EY728512; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGTGCACACATCCGGCTAACACTCACTCGTGGCAAAAAGGTT
ACTTCTGGCATGAGCCCAGCATTTAATCTTTATGGATGCACACTAATCGT
GCTTCCTGAATGGAAAACCCCAGTCTATGACAATACACATGGTGTAAATT
TGGTCACAGCAACCACACGTCGTAATTCTCCTAATAACTTGGATTCAAAG
ATTCACCACAATAACCTCCTCAATAATATACTTGCAAAGATAGAAGGGAA
TAATGCAAATGCTGGTGATGCAATCATGCTTGACAAGGACGGTTATGTAT
CTGAAACAAATGCCACAAATATCTTTTTGGTGAAGAAAGGCCGTGTTTTG
ACACCTCATGCTGATTATTGCCTTCCTGGTATCACTCGAGCAACTGTCAT
GGAACTTGTGGTGAAGGAAAACCTGGTCCTAGAGGAGCGCAGAATCAGCC
TATCAGAGTTTCACACAGCGGATGAGGTTTGGACAACTGGAACAATGGGA
GAAATAACACCGGTTGTGAAGATCGATGGGCGCATAGTTGGTGATGGAAA
AGTGGGGCCTGTAACTCAAAGAATTCAAAAGTTTACAAAAAGAGACAGAA
GAGTCAGGAGTGCCAATACCATCCTATTAGTCAATTCANATGTCTNCATG
GTCACAGAATGTTTGAAGTGATGGAGCTTCAAAAGATTGTCATTATTGAT
GGGCACAACGGCGCACAGACTGGAAATGATGAGCTGAAATTGCTTNCAAA
TNCATGAATGAATAAGCAGAGTATCCGNNCATAAAATTCATGTNGCTGCC
TTNAGTTTATGAATCTGTCATCTGCAAACTCCAGTCATCTATGTTGAATA
GTACGAGAACTGCAATCTATCTCTGTATGTTAA
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