EY728507

Overview
NameEY728507
Unique NameEY728507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPL 243
            Y GG F      SP YP + PKV  +T++YH NI+ +G +CL+IL+++W P L I+ ++  +  L T  N  DPL
Sbjct:  130 YEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPL 204          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12
Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILR-------------EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 306
            Y GG F  T      YP   PK+K  T+++HPN+   G VC++IL              E W PV +  TI+  +  + + PN E P N +AA   R+NP+ F+  VRR
Sbjct:   50 YEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRR 158          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1
Query:   40 FTFQVS--PIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL-REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESN 297
            F  ++S  P YP + P +K  TK+YHPN+D  G +CL I+  E+WKP      ++  L  L  +PN  +PL  + A +L  NP+LF  N
Sbjct:   51 FNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKN 139          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 34/96 (35.42%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED-WKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F F+ +    YP + P ++  T++YHPN D EGNVCL IL++  +KP + + +++  +  L  +PN +DPL    A   R++   F+   R
Sbjct:   51 YAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIAR 146          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPL 243
            Y GG F      SP YP + PKV  +T++YH NI+ +G +CL+IL+++W P L I+ ++  +  L T  N  DPL
Sbjct:   99 YEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPL 173          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPL 243
            Y GG F      SP YP + PKV  +T++YH NI+ +G +CL+IL+++W P L I+ ++  +  L T  N  DPL
Sbjct:   99 YEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPL 173          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12
Identity = 34/100 (34.00%), Postives = 55/100 (55.00%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL----REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 306
            Y  G F     +   YP E P+++  T +YHPNID  G +CL++L    +  W+P LNI T++  +  L  +PN +DPL  + ++  + N  +F  N R+
Sbjct:   46 YEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQ 145          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.560e-12
Identity = 32/97 (32.99%), Postives = 58/97 (59.79%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNID-LEGNVCLNILREDWKPVLN-INTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG +    +++  YP+++P +    K+YHPN+D + G+VCL+++ + W P+ + +N     L  L   PN  DPLN EAA+++  +   +E+ V+
Sbjct:   44 YQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVK 140          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 31/98 (31.63%), Postives = 53/98 (54.08%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAM 312
            Y  GTF    +    YP++ P VK  ++++HPN+   G +CL+IL+  W P  ++ +I+  +  LF  PN   P N EAA + +D+   +   V+  +
Sbjct:   48 YEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETV 145          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.568e-12
Identity = 31/98 (31.63%), Postives = 53/98 (54.08%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAM 312
            Y  GTF    +    YP++ P VK  ++++HPN+   G +CL+IL+  W P  ++ +I+  +  LF  PN   P N EAA + +D+   +   V+  +
Sbjct:   48 YEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETV 145          
The following BLAST results are available for this feature:
BLAST of EY728507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
UBCD2_DROME3.846e-1241.33Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophi... [more]
UBC15_SCHPO3.846e-1235.78Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UB2L6_HUMAN3.846e-1239.33Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo s... [more]
UBC14_SCHPO5.023e-1235.42Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccha... [more]
UB2E2_MOUSE5.023e-1241.33Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus... [more]
UB2E2_HUMAN5.023e-1241.33Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens... [more]
UBE2T_BOVIN6.560e-1234.00Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN... [more]
UBC4_WHEAT6.560e-1232.99Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum... [more]
UBC2_YEAST8.568e-1231.63Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_ASHGO8.568e-1231.63Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-G02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728507 ID=EY728507; Name=EY728507; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGAGGATATTATGTAGGTGGTACATTTGTGTTTACTTTCCA
AGTATCTCCCATCTACCCTCATGAGGCACCAAAGGTCAAATGCAAGACAA
AGGTTTACCACCCCAATATCGACCTGGAGGGAAACGTCTGCCTCAACATT
TTAAGAGAAGACTGGAAACCGGTTCTGAATATAAACACCATCATTTATGG
ACTCTTCCATCTTTTCACGCAACCCAATTATGAGGATCCCCTCAATCATG
AAGCAGCAGCTGTTTTAAGGGATAACCCAAAACTGTTTGAATCCAATGTT
AGAAGAGCAATGGCTGGTGGATATGTGGGGCAAACCTTCTTCATTCGGTG
CATATAATTGCTTTTGCCTGGAAATGCATGTTGCTTTGAAGGTAAGGAGC
TGTAAATTTGGTCGCAGGGCTGCTTCAATTTCTAGTAATGTGTTGGGACA
AAAATCTAAAATCTGCAAGGGAGTCGAAGTTTGTTGCTGCTGTACTTTGT
TTGTGTTGTGAATTGGCTGAAACAAATATTCCTATTTCAGTGAATCGATG
GGTTGTGCAGCTGCACTTGAAATTATCAGGTATTATCTTGTTAGGGTGGC
AATGCTTGCTGCTAGTTTCTTACCTATACATCAATCTCTTAAAAAAGGGA
GACGGGGTCAGGTCGTTTATGGAGAAACTAAAAAAAGGAGAGAGGGCGGC
CGTGCAGCGAACGAGCGACNTGCCGTGCGGCGACGCATTCTCTCTGTAGG
TCGCTGAGTCGCGGCGGGCGTGTTGTAGGGAGGGGATGGGAACGCTGGGG
TGCCAGGGTACTCCTTATCAATGCCTGTGCGATGGGGGAAGAGGAGGGTC
NGCCGGGGGGTGCGGGGGGCGGGCGGGGGCGG
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