EY728507

Overview
NameEY728507
Unique NameEY728507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 33/95 (34.74%), Postives = 50/95 (52.63%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F     +   +P   PK    TK++HPN+   G +C+N+L++DWK  L I  ++  +  L   PN E  LN EA  +L +N + + S  R
Sbjct:   55 YAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11
Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 1
Query:   25 GGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            GG F         YP   PK K +  ++HPN+   G VCL+IL E  DW+P + I  I+ G+  L  +PN +DP   EA  +   N   +E  VR
Sbjct:   55 GGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVR 149          
The following BLAST results are available for this feature:
BLAST of EY728507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
UBE2S_RANCA1.461e-1134.74Ubiquitin-conjugating enzyme E2 S OS=Rana catesbei... [more]
UBC9_XENTR1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK1.461e-1136.84SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE1.461e-1136.84SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UBC9A_DANRE1.461e-1136.84SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-G02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728507 ID=EY728507; Name=EY728507; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGAGGATATTATGTAGGTGGTACATTTGTGTTTACTTTCCA
AGTATCTCCCATCTACCCTCATGAGGCACCAAAGGTCAAATGCAAGACAA
AGGTTTACCACCCCAATATCGACCTGGAGGGAAACGTCTGCCTCAACATT
TTAAGAGAAGACTGGAAACCGGTTCTGAATATAAACACCATCATTTATGG
ACTCTTCCATCTTTTCACGCAACCCAATTATGAGGATCCCCTCAATCATG
AAGCAGCAGCTGTTTTAAGGGATAACCCAAAACTGTTTGAATCCAATGTT
AGAAGAGCAATGGCTGGTGGATATGTGGGGCAAACCTTCTTCATTCGGTG
CATATAATTGCTTTTGCCTGGAAATGCATGTTGCTTTGAAGGTAAGGAGC
TGTAAATTTGGTCGCAGGGCTGCTTCAATTTCTAGTAATGTGTTGGGACA
AAAATCTAAAATCTGCAAGGGAGTCGAAGTTTGTTGCTGCTGTACTTTGT
TTGTGTTGTGAATTGGCTGAAACAAATATTCCTATTTCAGTGAATCGATG
GGTTGTGCAGCTGCACTTGAAATTATCAGGTATTATCTTGTTAGGGTGGC
AATGCTTGCTGCTAGTTTCTTACCTATACATCAATCTCTTAAAAAAGGGA
GACGGGGTCAGGTCGTTTATGGAGAAACTAAAAAAAGGAGAGAGGGCGGC
CGTGCAGCGAACGAGCGACNTGCCGTGCGGCGACGCATTCTCTCTGTAGG
TCGCTGAGTCGCGGCGGGCGTGTTGTAGGGAGGGGATGGGAACGCTGGGG
TGCCAGGGTACTCCTTATCAATGCCTGTGCGATGGGGGAAGAGGAGGGTC
NGCCGGGGGGTGCGGGGGGCGGGCGGGGGCGG
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