EY728507

Overview
NameEY728507
Unique NameEY728507
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.146e-14
Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F  T      YP + PKV+  T++YHPN++  G++CL+ILR  W P L I+ ++  +  L   PN +DPL  E A + + +   +    R
Sbjct:   45 YQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAR 139          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F  T      YP + PKV   T++YHPNI+  G++CL+ILR  W P L I+ ++  +  L   PN +DPL  E A + + + + +    R
Sbjct:   45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAR 139          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 276
            Y GG F     +   YP  APKV+  TK+YHPNID  G +CL+IL++ W P L I T++  +  L + PN +DPL+   A   + N
Sbjct:   49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 134          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 276
            Y GG F     +   YP  APKV+  TK+YHPNID  G +CL+IL++ W P L I T++  +  L + PN +DPL+   A   + N
Sbjct:   49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSN 134          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F  T      YP + PKV   T++YHPNI+  G++CL+ILR  W P L I+ ++  +  L   PN +DPL  E A + + + + +    R
Sbjct:   45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAR 139          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNIL----REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 306
            Y GG F     V   YP E PK++  T +YHPNID  G +CL+IL    +  W+P LNI+T++  +  L ++PN +DPL  + ++  + N  +F SN ++
Sbjct:   46 YEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKK 145          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMA 315
            Y GG F  + +    YP + PK   KT +YHPNI+ EG++C+NIL++ W P L +  ++  +  L  +PN +DPL  E   + ++N   F+   R   A
Sbjct:   51 YEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTA 149          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F     +   YP   P V+  TK+YHPN+D  G +CL+ L++DW P L I T++  +  L   PN +DPL+++ A + ++N     +N R
Sbjct:   46 YEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANAR 140          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F  T      YP + PKV   T++YHPNI+  G++CL+ILR  W P L I+ ++  +  L   PN +DPL  E A + + + + +    R
Sbjct:   45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139          
BLAST of EY728507 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   19 YVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVR 303
            Y GG F  T      YP + PKV   T++YHPNI+  G++CL+ILR  W P L I+ ++  +  L   PN +DPL  E A + + + + +    R
Sbjct:   45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 139          
The following BLAST results are available for this feature:
BLAST of EY728507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
U2D2B_MOUSE3.146e-1435.79Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculu... [more]
UBCD1_DROME4.109e-1436.84Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC36_ARATH4.109e-1441.86Ubiquitin carrier protein E2 36 OS=Arabidopsis tha... [more]
UBC35_ARATH4.109e-1441.86Ubiquitin carrier protein E2 35 OS=Arabidopsis tha... [more]
UBC2_CAEEL4.109e-1436.84Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditi... [more]
UBE2T_XENLA5.366e-1438.00Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevi... [more]
UBC31_ARATH5.366e-1435.35Probable ubiquitin carrier protein E2 31 OS=Arabid... [more]
UBC13_SCHPO5.366e-1436.84Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccha... [more]
UB2D2_XENLA5.366e-1436.84Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laev... [more]
UB2D2_RAT5.366e-1436.84Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-G02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728507 ID=EY728507; Name=EY728507; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGAGGATATTATGTAGGTGGTACATTTGTGTTTACTTTCCA
AGTATCTCCCATCTACCCTCATGAGGCACCAAAGGTCAAATGCAAGACAA
AGGTTTACCACCCCAATATCGACCTGGAGGGAAACGTCTGCCTCAACATT
TTAAGAGAAGACTGGAAACCGGTTCTGAATATAAACACCATCATTTATGG
ACTCTTCCATCTTTTCACGCAACCCAATTATGAGGATCCCCTCAATCATG
AAGCAGCAGCTGTTTTAAGGGATAACCCAAAACTGTTTGAATCCAATGTT
AGAAGAGCAATGGCTGGTGGATATGTGGGGCAAACCTTCTTCATTCGGTG
CATATAATTGCTTTTGCCTGGAAATGCATGTTGCTTTGAAGGTAAGGAGC
TGTAAATTTGGTCGCAGGGCTGCTTCAATTTCTAGTAATGTGTTGGGACA
AAAATCTAAAATCTGCAAGGGAGTCGAAGTTTGTTGCTGCTGTACTTTGT
TTGTGTTGTGAATTGGCTGAAACAAATATTCCTATTTCAGTGAATCGATG
GGTTGTGCAGCTGCACTTGAAATTATCAGGTATTATCTTGTTAGGGTGGC
AATGCTTGCTGCTAGTTTCTTACCTATACATCAATCTCTTAAAAAAGGGA
GACGGGGTCAGGTCGTTTATGGAGAAACTAAAAAAAGGAGAGAGGGCGGC
CGTGCAGCGAACGAGCGACNTGCCGTGCGGCGACGCATTCTCTCTGTAGG
TCGCTGAGTCGCGGCGGGCGTGTTGTAGGGAGGGGATGGGAACGCTGGGG
TGCCAGGGTACTCCTTATCAATGCCTGTGCGATGGGGGAAGAGGAGGGTC
NGCCGGGGGGTGCGGGGGGCGGGCGGGGGCGG
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