EY728505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728505 vs. ExPASy Swiss-Prot
Match: RS4E_STAMF (30S ribosomal protein S4e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps4e PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 12 AKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVG----IIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 380 AK+KL ++ + + G +N +DGR I+ DP + K T+++ + E +I ++I D G +V+++GGRN GRVG I K +H+ + I+D G++F T L VF IGK +P + LP+G Sbjct: 120 AKYKLSRIENKTTVKGGHIQLNLHDGRNVLIKVSDPKNPVEDIYKTLGTLQISIPEQQILNYIPLDEGTLVIISGGRNVGRVGKVVSIHKGIRRHR---SIVTIEDKHGNKFQTSLTYVFPIGK-EEPLIKLPEG 250
BLAST of EY728505 vs. ExPASy Swiss-Prot
Match: RS4E_HYPBU (30S ribosomal protein S4e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 12 AKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPL-------IKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIG-KGSKPWVSLPKG 380 A+FKL ++ + G ++ +DGR IR DP K T+K+ + E ++ + +VG++V++ GGRN GRVG I + + + I+DA G + T L VF I +PW+SLP+G Sbjct: 120 AQFKLGRIEDKSTVKGGHIQLHLHDGRNVLIRVSDPTNPVEAKPYKTLGTVKISIPEQQLLGYAPLEVGSLVIIFGGRNVGRVGRIVSIQPGMRRRGIVTIEDARGEKIQTSLEYVFVIAPPNEEPWISLPEG 252
BLAST of EY728505 vs. ExPASy Swiss-Prot
Match: RS4E_AERPE (30S ribosomal protein S4e OS=Aeropyrum pernix GN=rps4e PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 72 INTYDGRTI--RYPDP------LIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFET-IHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKG 380 +N +DGR I R DP + + DT+ + + +I IKF G I ++ GGRN GRVG++K+ +K G T + ++DA G+ F T L VF IG +P +SLP+G Sbjct: 140 LNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVGVVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250 The following BLAST results are available for this feature:
BLAST of EY728505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728505 ID=EY728505; Name=EY728505; organism=Citrus sinensis; type=EST; length=709bpback to top |