EY728494

Overview
NameEY728494
Unique NameEY728494
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10374 contig Csv1_Contig10374:5..893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.324e-44
Identity = 107/231 (46.32%), Postives = 141/231 (61.04%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT04_SOLTU (Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.324e-44
Identity = 107/231 (46.32%), Postives = 141/231 (61.04%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.730e-44
Identity = 104/219 (47.49%), Postives = 136/219 (62.10%), Query Frame = 3
Query:  120 KKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            K +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL+++
Sbjct:   27 KMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.259e-44
Identity = 104/220 (47.27%), Postives = 135/220 (61.36%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  SD G    F+LVDG VA   +P LL+++
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAVILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIIPFYFEHGPHIF------NYSGSI--------FGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPMYFPPHYFITHTSD-GDIYEFNLVDGAVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 104/231 (45.02%), Postives = 138/231 (59.74%), Query Frame = 3
Query:   93 MATAGSA---EGKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT GS     G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF              +    + GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S+  R   F+LVDG VA   +P LL+++
Sbjct:    3 LATTGSTCATLGEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF--------------NSSGTIFGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFVTHTSNGDRYE-FNLVDGAVATVGDPALLSLS 218          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PATM1_SOLTU (Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT17_SOLCD (Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 102/220 (46.36%), Postives = 137/220 (62.27%), Query Frame = 3
Query:  117 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M++ PN+   PF+AAK+I  FY EHGP+IF    +              +LGPKYDGKYL  ++ E LG+  V + LT VVI +FDIK  +PVIF+ ++   +   +A++ DI  ST+AAPTYFPPHY  T  S +G    F+LVDG VA   +P LL+I+
Sbjct:   26 GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQ--------------ILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISYSTAAAPTYFPPHYFVTNTS-NGDEYEFNLVDGAVATVADPALLSIS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT14_SOLTU (Patatin-14 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PAT10_SOLTU (Patatin-10 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.853e-44
Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS 230          
BLAST of EY728494 vs. ExPASy Swiss-Prot
Match: PATB1_SOLTU (Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.572e-44
Identity = 106/231 (45.89%), Postives = 140/231 (60.61%), Query Frame = 3
Query:   93 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGRTRTFDLVDGGVA-ANNPTLLAIA 770
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC S +AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL+++
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSIAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS 230          
The following BLAST results are available for this feature:
BLAST of EY728494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT06_SOLTU1.324e-4446.32Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PAT04_SOLTU1.324e-4446.32Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1[more]
PATM2_SOLTU1.730e-4447.49Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K2_SOLTU2.259e-4447.27Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]
PT2K1_SOLTU3.853e-4445.02Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]
PATM1_SOLTU3.853e-4446.32Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT17_SOLCD3.853e-4446.36Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1[more]
PAT14_SOLTU3.853e-4446.32Patatin-14 OS=Solanum tuberosum PE=2 SV=1[more]
PAT10_SOLTU3.853e-4446.32Patatin-10 OS=Solanum tuberosum PE=2 SV=1[more]
PATB1_SOLTU6.572e-4445.89Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-E08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728494 ID=EY728494; Name=EY728494; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGGCAATAATTTCGAATTTAAAAGCTGCTCGATCTGATCGT
ACTTCTATTTAACTTCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCAC
TGCCGGTTCTGCAGAAGGAAAGAAAATAACAGTTCTGAGCATCGATGGAG
GTGGCATTAGGGGCATTATTCCGGGCACTATTTTAGCCTTTCTTGAATCC
AAGCTCCAGGAATTGGATGGACCAAGTGCAAGAATTGCAGATTATTTTGA
TGTAGTAGCAGGAACAAGCACCGGCGGATTGGTAACCACCATGCTTACGG
CACCCAACAAGGAAGGCGGACCTTTCAGTGCTGCAAAGGATATCAATAAT
TTTTATCTTGAGCACGGTCCTAAAATTTTCCCTCAAATTAGCCGCAGCAA
CTTCTTGGAATCGATAGCAAGCTCTATCGATAAACTGCTGCTTGGACCAA
AGTATGATGGGAAGTACCTGCGGACACTAGTAAACGAGCTACTAGGAGAC
GTTACTGTGAAAGAGACTCTTACCAACGTGGTTATACCAACTTTTGACAT
CAAGCTTCTTCAACCAGTCATCTTCTCAACCACCGATGGAAAAGAGAACG
TTTTGAAGAATGCTCGGCTGGCTGATATATGCATAAGCACTTCTGCAGCG
CCCACTTACTTCCCACCTCACTACTTGGAGACTAAGGACAGTGACAGTGG
CAGAACCCGAACTTTTGATCTTGTTGACGGTGGAGTTGCTGCTAATAATC
CTACCCTATTGGCAATAGCCACATATCGAAAGAAATGGTGAAGCAAAACC
CCAGTTCAGGAACAAAACCCATTGACCGTAGAGAATGCTGGTACTATCAC
TAGCCAGGTCAGCCAGAAGAATGAGTAAATGCACCAAACCTC
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