EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CHLAA (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.403e-22 Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 + ++ A AL L +RTGRAS +++H+ VE G+ MPLN LA +SV + + + I PYD N +K +E AI S LGLNP DG+ + +P LT+E + + K+V E+VK S+R R+ A+D +KK Sbjct: 11 AHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRNQRRDAIDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRU0 (Ribosome-recycling factor OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=frr PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.751e-22 Identity = 60/153 (39.22%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 E + E + +LSRE +R GRA+ +LD I VE GV PLN LA ++V +++ L I+P+D +++K++E AI +S LG+ P DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 7 EKANQRFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENQKIAIRNIRRDAMDEAKKQEKNKEITEDELKALEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_THET8 (Ribosome-recycling factor OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=frr PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.510e-22 Identity = 64/159 (40.25%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 289 TVKET---TVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSS--LPXDSMKRLEKE 750 T+KE T S M+ ++ L L LRTGRA+P +L H+ VE G +PLN +A V+ D +TL + +D N LK +E AI S LGLNP G L IP LT+E + + + V + +E+ + +IR R++ALD +KK L D KR E E Sbjct: 2 TLKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAE 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_THET2 (Ribosome-recycling factor OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=frr PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.510e-22 Identity = 64/159 (40.25%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 289 TVKET---TVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSS--LPXDSMKRLEKE 750 T+KE T S M+ ++ L L LRTGRA+P +L H+ VE G +PLN +A V+ D +TL + +D N LK +E AI S LGLNP G L IP LT+E + + + V + +E+ + +IR R++ALD +KK L D KR E E Sbjct: 2 TLKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAE 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACCN (Ribosome-recycling factor OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=frr PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.510e-22 Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +ED K +IR R+ D +KK Sbjct: 1 MGQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAKVAIRNVRRDGNDELKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_SORC5 (Ribosome-recycling factor OS=Sorangium cellulosum (strain So ce56) GN=frr PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.809e-22 Identity = 63/153 (41.18%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKA---LDMMKKAGSSLPXDSMKRLEKESADDI 765 +E AI AL R+L K+RTGRA+ MLD I V+ GV P+ +A VSV + + +S+ P++ N +K +E AI S LGLNP+VD + IP LT+E + M K+ K ED K +IR+ R+ A +D ++K G + D R +K+ DD+ Sbjct: 13 IEKAIEALRRDLAKVRTGRANAAMLDGIRVDYYGVPTPIVQMATVSVPEPRLISVKPWEKNQVKAIEKAIRESDLGLNPQVDADLIRLPIPPLTEERRREMVKLTKKNGEDCKVAIRKHRRDANEMIDSLEKDG-DVSGDEADRAKKK-VDDV 163
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_OCEIH (Ribosome-recycling factor OS=Oceanobacillus iheyensis GN=frr PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.809e-22 Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +ME A+ ALS+ L +R GRA+P +LD + V+ G PLN LA V +++ L+I PYD + + ++E AI + LGL+P DG + IPALT+E + + KVV K SE+ K IR R+ D +KK Sbjct: 12 KMEQAVQALSKNLASVRAGRANPSILDSVFVDYYGASTPLNQLASVGAPEARLLTITPYDKSAIGDIEKAIQKADLGLSPSSDGNIIRINIPALTQERRKDLVKVVGKYSEEAKVQIRNIRRDTNDQLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACLD (Ribosome-recycling factor OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=frr PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.809e-22 Identity = 56/137 (40.88%), Postives = 82/137 (59.85%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 V T +M+ AI A REL +R GRA+P +LD + VE G + PLN +A ++V +++ L I PYD L ++E AI + LG+ P DG + IP LT+E + + K+V K SED K ++R R+ A D +KK Sbjct: 5 VMNETKERMQKAISAYQRELATVRAGRANPSLLDKVAVEYYGAQTPLNQIASITVPEARMLVITPYDKTALGDIEKAIQKADLGVTPSNDGNIIRITIPPLTEERRKELAKLVKKYSEDAKVAVRNIRRDANDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRA5 (Ribosome-recycling factor OS=Streptococcus agalactiae serotype V GN=frr PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.281e-21 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 + E + +LSRE +R GRA+ +LD I VE G PLN LA ++V +++ L I+P+D +++K++E AI S LG+NP DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 12 RFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKNKEITEDDLKSLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRA3 (Ribosome-recycling factor OS=Streptococcus agalactiae serotype III GN=frr PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.281e-21 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 + E + +LSRE +R GRA+ +LD I VE G PLN LA ++V +++ L I+P+D +++K++E AI S LG+NP DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 12 RFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKNKEITEDDLKSLEKD 159 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |