EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRA1 (Ribosome-recycling factor OS=Streptococcus agalactiae serotype Ia GN=frr PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.281e-21 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 + E + +LSRE +R GRA+ +LD I VE G PLN LA ++V +++ L I+P+D +++K++E AI S LG+NP DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 12 RFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIRNIRRDAMDEAKKQEKNKEITEDDLKSLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOMG (Ribosome-recycling factor OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=frr PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.281e-21 Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 + ME ++ AL RE K+RTGRA+ G+LD I VE G PL+ +A +SV + +T++I P++ + +E AI+++ LG P DG+ + ++P LT+E + + K + K +ED K ++R R+ +D +KK + D +KR EKE D Sbjct: 11 AHMEKSVDALRREYQKVRTGRATTGLLDDIKVEYYGNPSPLSQVATLSVPEPRTITIQPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKKMAEDTKVAVRNIRRDGIDSLKKLEKDKKISEDDLKRAEKEVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOSM (Ribosome-recycling factor OS=Geobacter sp. (strain M21) GN=frr PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.673e-21 Identity = 53/150 (35.33%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 M +I +L +E K+RTGRA+ +LD I +++ G PLN +A +++ +++T++I+P+D + +E AI++S LGLNP DG+ + +P LT+E + + K + + +E+ K ++R R+ A+D +KK S+ D +KR EK+ D Sbjct: 13 MGKSIESLRKEYQKVRTGRATTSLLDDIKIDSYGTLSPLNQVATLAIPEARTITISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLVLPPLTEERRKDIVKQLKRDAEEAKVALRNIRRDAIDQLKKLEKDKSISEDELKRAEKDVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CHLAD (Ribosome-recycling factor OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=frr PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.673e-21 Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 + ++ A AL L +RTGRAS +++H+ VE G MPLN LA +SV + + + I PYD +K +E AI S LGLNP DG+ + +P LT+E + + K+V E+VK S+R R+ A+D +KK Sbjct: 11 AHLKKATEALRHHLASIRTGRASAALVEHLHVEAYGTNMPLNQLANISVPEPRMIIIQPYDTGMIKAIEKAIQQSDLGLNPSNDGRIIRLPVPPLTEERRRELVKMVRHRVEEVKVSVRNQRRDAIDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_SYNJB (Ribosome-recycling factor OS=Synechococcus sp. GN=frr PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 61/147 (41.50%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 M A+ A R +RTGRA+ +LD I VE GV PL LA ++ DS TL I P+DP+TL +E AIV+S LGL P DG+ + IP LT+E + + K VAK +E+ + SIR R+ +D ++K L D K L+ + Sbjct: 10 MNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDD 156
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_LEPCP (Ribosome-recycling factor OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=frr PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 52/137 (37.96%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +K+ ++M ++ A EL K+RTGRA PG+LD + V+ G +PL+ +A V+++D++T+S+ P++ + +++E AI S LGLNP G + +PALT+E + + KVV ED K ++R R+ A D KK Sbjct: 6 IKKNAEAKMAKSVEAFKNELQKIRTGRAHPGILDQVHVDYYGSNLPLSQVANVTLIDARTISVQPWEKSMAQKIEKAIRESDLGLNPSSMGDLIRVPMPALTEERRKELTKVVRHAGEDSKVAVRNLRRDANDQAKK 142
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOUR (Ribosome-recycling factor OS=Geobacter uraniireducens (strain Rf4) GN=frr PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 + M+ I AL +E ++RTGRAS G+LD I V+ G P+N +A ++V + +T+++ P+D + +E AI+++ LGL P DG+ + IP LT+E + + K + K +ED K ++R R+ A+D +KK + D +KR EKE D Sbjct: 11 THMDKTIDALRKEYQRVRTGRASTGLLDEIKVDFYGTPSPINQVATLAVPEPRTITLQPWDAKMIPVIEKAIMNANLGLTPANDGKVIRLNIPPLTEERRKDIVKQLKKLAEDAKVAVRNIRRDAIDELKKQEKDKKISEDDLKRAEKEVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACP2 (Ribosome-recycling factor OS=Bacillus pumilus (strain SAFR-032) GN=frr PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21 Identity = 55/137 (40.15%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 V T +ME A+ A REL +R GRA+ +LD + V+ G + PLN +A ++V +++ L I PYD + ++E +I S LG+ P DG + AIPALT+E + + KVV K SE+ K ++R R+ A D +KK Sbjct: 5 VLNQTKEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARMLIITPYDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAKVAVRNVRRDANDELKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_SYMTH (Ribosome-recycling factor OS=Symbiobacterium thermophilum GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21 Identity = 56/148 (37.84%), Postives = 92/148 (62.16%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +M+ A+ +EL +R RA+P +LD + VE G ++P+N++A + V D +TL I P+D + +K +E AI +S LGLNP DGQ + +IP +T+E + + KVVAK +E+ + +IR R+ A + +KK ++ D KR + E Sbjct: 12 RMKKAVEVFRQELAGMRANRATPALLDKVRVEAYGSEVPVNNVATIEVPDPRTLVIKPWDRSLIKAIERAINASDLGLNPTNDGQVIRLSIPPMTEERRRELVKVVAKRTEEQRVAIRNIRRDANEQIKKLEKDKAVSEDESKRAQDE 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_METFK (Ribosome-recycling factor OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21 Identity = 58/155 (37.42%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 VK T +M+ +I AL +L+K+RTGRA G+LDH+ VE G + +N +A VS+ D++TL++ Y+ N ++E AI + LGLNP +G + +P LT+E + + KVV +E+ K +IR R+ A D +KK + D +R + E Sbjct: 5 VKNTAEQKMQKSIEALKADLSKVRTGRAHTGLLDHVQVEYYGSMVAINQVASVSLGDARTLNVQAYEKNMTPKVEKAIRDADLGLNPATNGDIIRVPMPMLTEERRRDLVKVVRSEAENAKVAIRNVRRDANDALKKLVKDKEISEDDERRAQDE 159 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |