EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESAA (Ribosome-recycling factor OS=Desulfatibacillum alkenivorans (strain AK-01) GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVK---QSIRRSRQKALDMMKKAG 708 V E +M+ AI AL + L ++RTGRAS MLD + ++ G P+N A V++ +S+ ++I P+D + +K++E AI+ S LGLNP DG+ + AIP LT++ + M K+V K SE+ K ++IRR + + MKK G Sbjct: 5 VYEEAREKMDKAIAALEKGLLRVRTGRASLSMLDGVKLDYYGTPTPINQAATVAIPESRLITIQPWDASVIKDIEKAILKSDLGLNPSNDGKIIRIAIPPLTEDRRKEMVKLVNKMSEEGKISVRNIRRDANETIKSMKKDG 146
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_XANP2 (Ribosome-recycling factor OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21 Identity = 59/148 (39.86%), Postives = 85/148 (57.43%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA--GSSLPXDSMKRLEKE 750 +M+ A+ L EL LRTGRAS +LD I +E G +MPLN +A VSV +++ LS+ +D + +E AI S LGLNP +GQ L IP L +E Q + KV K +E K ++R R+ +D +KK + D + RL K+ Sbjct: 14 RMQGAVGVLRDELGGLRTGRASASLLDPITIEAYGARMPLNQVATVSVPEARLLSVQVWDRGMVSAVEKAIRDSNLGLNPNTEGQVLRLRIPELNQERRQELVKVAHKYAEAAKVAVRHVRRDGMDHLKKVEKDGEMSSDDLDRLSKD 161
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRSY (Ribosome-recycling factor OS=Streptococcus suis (strain 05ZYH33) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21 Identity = 59/148 (39.86%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA--GSSLPXDSMKRLEKE 750 +M + +L+RE + +R GRA+ +LD I VE G PLN LA ++V +++ L I P+D + LK++E A+ +S LGL P+ DG + IPALT+E + + K V K E+ K +IR R+ A+D KKA + D +K LEK+ Sbjct: 12 RMNQSHQSLAREFSHIRAGRANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRS2 (Ribosome-recycling factor OS=Streptococcus suis (strain 98HAH33) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21 Identity = 59/148 (39.86%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA--GSSLPXDSMKRLEKE 750 +M + +L+RE + +R GRA+ +LD I VE G PLN LA ++V +++ L I P+D + LK++E A+ +S LGL P+ DG + IPALT+E + + K V K E+ K +IR R+ A+D KKA + D +K LEK+ Sbjct: 12 RMNQSHQSLAREFSHIRAGRANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_SERP5 (Ribosome-recycling factor OS=Serratia proteamaculans (strain 568) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21 Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK 699 +++ S+ME ++ A +++K+RTGRASP +LD I+VE G PL LA V+V DS+TL IN +D + +E AI+SS LGLNP G + +PALT+E + + K+V +E + ++R R+ A D +K Sbjct: 5 IRKDADSRMEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGASTPLRQLASVTVEDSRTLKINVFDRSISAAVEKAIMSSDLGLNPSSAGSDIRVPLPALTEERRKDLIKIVRNEAEQGRVAVRNVRRDANDKVK 140
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_MAGSA (Ribosome-recycling factor OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=frr PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.868e-21 Identity = 55/155 (35.48%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +K+ +M++A+ L +E + LR+GRAS +LD ++VE G MPL+ V V + + L++ +D + +K +E AI ++ LGLNP+ DGQ + IP L +E + + KV K SE + S+R R+ +D +KK + D +K+ EKE Sbjct: 10 LKKDITRRMDSAVEVLKKEFSGLRSGRASINLLDPVVVEAYGQTMPLSQCGTVGVPEPRMLTVQVWDKSQVKAVEKAIANAGLGLNPQADGQMIRVPIPPLNEERRKELQKVAGKYSEQARISVRNVRRDGMDTLKKMEKDGHISEDEIKKHEKE 164
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_LACCB (Ribosome-recycling factor OS=Lactobacillus casei (strain BL23) GN=frr PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.868e-21 Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 334 ALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +L REL +R GRA+ +L+ I VE G PLN +A +++ + + L ++PYD ++LK +E A+ +S LG+NP DG + IP LT E + + K V K SE K +IR R++ LD +K+ + D + RLEK+ Sbjct: 19 SLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAIRNIRREGLDKLKRQEKDGDITEDDLHRLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_LACC3 (Ribosome-recycling factor OS=Lactobacillus casei (strain ATCC 334) GN=frr PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.868e-21 Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 334 ALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +L REL +R GRA+ +L+ I VE G PLN +A +++ + + L ++PYD ++LK +E A+ +S LG+NP DG + IP LT E + + K V K SE K +IR R++ LD +K+ + D + RLEK+ Sbjct: 19 SLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAIRNIRREGLDKLKRQEKDGDITEDDLHRLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_THEEB (Ribosome-recycling factor OS=Thermosynechococcus elongatus (strain BP-1) GN=frr PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21 Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSS--LPXDSMKRLEKE 750 +M+ ++ A + +RTGRA+ +LD ++V+ G + PL LA VS D+ T+ I PYD +TL +E AI S LGL P DG + IP LT E + + K AK +E K +IR R+ A+D +KKAG + L D +K L+++ Sbjct: 9 RMQKSVEATQHDFNSIRTGRANAALLDRVMVDYYGTETPLRSLANVSTPDATTILIQPYDRSTLASIEKAIQLSDLGLTPNNDGSSVRLNIPPLTTERRKELVKTAAKIAEGGKVAIRNIRRDAIDHIKKAGKAGELTEDEVKDLQEK 156
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRSV (Ribosome-recycling factor OS=Streptococcus sanguinis (strain SK36) GN=frr PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.358e-21 Identity = 55/155 (35.48%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 + E +M + +L+RE +R GRA+ +LD I VE GV+ PLN +A +++ +++ L + P+D +++K++E A+ +S LG+ P DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 5 IVEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKD 159 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |