EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_SYNE7 (Ribosome-recycling factor OS=Synechococcus elongatus (strain PCC 7942) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 51/135 (37.78%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSS 714 S M+ ++ A R +RTGRA+ +LD I+V+ G + PL LA +S D+ TL I P+D +++ +E AI S +GL P DGQ + IP LT + + + K+ AK +E+ K +IR R+ A+D ++K S Sbjct: 8 STMQKSVEATLRSFNTIRTGRANASLLDKIVVDYYGSETPLKSLASISTPDASTLQIQPFDRSSMGAIEKAISLSDIGLTPNNDGQIIRLNIPPLTSDRRKELVKLAAKYAEEGKVAIRNVRRDAIDSIRKLEKS 142
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_PELPD (Ribosome-recycling factor OS=Pelobacter propionicus (strain DSM 2379) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 49/160 (30.63%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 289 TVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESADD 762 TV + ME + L E K+RTGRAS +LD + ++ G P++ +A +++ + + ++I P++ + +E AI ++ +GL P DG+ + ++P LT+E + + K + K +ED + ++R R+ A+D +KK S+ D +K+ EKE D+ Sbjct: 4 TVLSDMKTHMEKTVAVLKAEFQKVRTGRASTAILDSVKMDYYGNPTPISQIATLAIPEPRMITITPWEAKQISVIEKAIFNANIGLTPSNDGKSIRLSLPPLTEERRREIVKDLKKMAEDNRVALRNIRRDAIDRLKKLEKDKSITEDELKKYEKEVQDN 163
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_JANSC (Ribosome-recycling factor OS=Jannaschia sp. (strain CCS1) GN=frr PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 46/134 (34.33%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSS 714 +ME AI +L E LRTGRAS ML+ ++V+ G P+N + V+V + + +++N +D + ++E AI S LG+NP+++G ++ IP L +E + + KV +E+ + ++R R+ +D +KKA +S Sbjct: 15 RMEGAIASLRTEFASLRTGRASASMLEPVMVDAYGAMTPINQVGTVNVPEPRMVTVNVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGTYAENARVAVRNVRRDGMDQIKKADTS 148
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESAH (Ribosome-recycling factor OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 52/162 (32.10%), Postives = 93/162 (57.41%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMKRLEKESAD 759 I KET +M ++ L +E+T++RTGRAS MLD + V+ G PLN +A +++ +S+ +++ P+D + +KE+E I+ + +GL P DG+ + IP LT++ + + K V T E+ K ++R R+ + D +K + + D + +KE D Sbjct: 2 INELYKETR-DRMVKSVKTLEKEMTRVRTGRASMTMLDGVKVDYYGTLTPLNQMASIAIPESRMITVQPWDISAIKEVEKGILKANIGLTPSSDGKIIRITIPPLTEDRRREIAKTVHNTCEEFKVAVRNIRRDSNDTLKSLQKDGDISEDENFKAQKEVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CYAP7 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7424) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 M+ I + R +RTGRA+ +LD ++V+ G + PL LA ++ D+ T++I PYD ++ ++E AI S +GL P DGQ + IP LT E + + K+ K +E+ K +IR R+ A+D ++K L D + L+ E Sbjct: 10 MQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTIAIQPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGKVAIRNIRRDAIDSVRKQEKNHELSEDESRNLQDE 156
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CYAA5 (Ribosome-recycling factor OS=Cyanothece sp. (strain ATCC 51142) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 52/147 (35.37%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 M+ ++ A R +RTGRA+ +LD + VE G + PL LA +S D+ T+ I PYD ++ ++E AI S +GL P DGQ + IP LT+E + + K+ +K +E+ K +IR R+ A+D ++K S + D + L+ + Sbjct: 10 MQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTIMIQPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGKVAIRNIRRDAIDDVRKQEKNSDISEDESRGLQDD 156
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CUPTR (Ribosome-recycling factor OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 46/136 (33.82%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 295 KETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 K++ +M+ +I A +L K+RTGRA G+LDH+ V+ G +P++ +A + + D++T+++ P++ + +E AI LGLNP G+ + +PALT+E + + KVV +E K ++R R+ A + KK Sbjct: 7 KKSAEQKMQKSIEAFKADLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVAAIGLADARTITVQPWEKKMVSAVEKAIRDCDLGLNPATMGEVIRVPMPALTEERRKELTKVVKGEAEGAKVAVRNLRRDANEQFKK 142
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CLOPS (Ribosome-recycling factor OS=Clostridium perfringens (strain SM101 / Type A) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMKRLEKE 750 +M I +L+ EL ++ GRA+P MLD I VE G PLN +A VS + + L I P++ LKE+E AI+ S LG+NP DG + +P LT+E + + K V K E K +IR R+ A D +K K ++ D MK+ E + Sbjct: 12 KMNKTINSLNSELATMKAGRANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CLOPE (Ribosome-recycling factor OS=Clostridium perfringens GN=frr PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMKRLEKE 750 +M I +L+ EL ++ GRA+P MLD I VE G PLN +A VS + + L I P++ LKE+E AI+ S LG+NP DG + +P LT+E + + K V K E K +IR R+ A D +K K ++ D MK+ E + Sbjct: 12 KMNKTINSLNSELATMKAGRANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CLOP1 (Ribosome-recycling factor OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=frr PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.731e-18 Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMKRLEKE 750 +M I +L+ EL ++ GRA+P MLD I VE G PLN +A VS + + L I P++ LKE+E AI+ S LG+NP DG + +P LT+E + + K V K E K +IR R+ A D +K K ++ D MK+ E + Sbjct: 12 KMNKTINSLNSELATMKAGRANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDD 159 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |