EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_AERS4 (Ribosome-recycling factor OS=Aeromonas salmonicida (strain A449) GN=frr PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.038e-18 Identity = 49/131 (37.40%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKA 684 +K +M ++ +L +++K+RTGRA P +LD I VE G PL LA V D++TLSI+ +D + ++ +E AI++S LGLNP +GQ L +P LT+E + + K+V +E + ++R R+ A Sbjct: 5 IKNDAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLSISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGARVAVRNIRRDA 135
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_AERHH (Ribosome-recycling factor OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=frr PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.038e-18 Identity = 49/131 (37.40%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKA 684 +K +M ++ +L +++K+RTGRA P +LD I VE G PL LA V D++TLSI+ +D + ++ +E AI++S LGLNP +GQ L +P LT+E + + K+V +E + ++R R+ A Sbjct: 5 IKNDAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLSISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGARVAVRNIRRDA 135
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_RHIEC (Ribosome-recycling factor OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 48/131 (36.64%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA 705 +M+ A+ A ++ LRTGRAS +LD + +E G ++PLN +A ++V + + L+++ +D + + +E I S LGLNP VDGQ L +P L +E +++ KV +E K +IR R+ +D +KKA Sbjct: 13 RMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITVPEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHDYAEKSKVAIRHVRRDGMDGLKKA 143
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_RHIE6 (Ribosome-recycling factor OS=Rhizobium etli (strain CIAT 652) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 48/131 (36.64%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA 705 +M+ A+ A ++ LRTGRAS +LD + +E G ++PLN +A ++V + + L+++ +D + + +E I S LGLNP VDGQ L +P L +E +++ KV +E K +IR R+ +D +KKA Sbjct: 13 RMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITVPEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHDYAEKSKVAIRHVRRDGMDGLKKA 143
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_MANSM (Ribosome-recycling factor OS=Mannheimia succiniciproducens (strain MBEL55E) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 51/136 (37.50%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK 699 +K+ T +ME ++ AL + K+RTGRA P +LD I V+ G PL LA V D++TL++ +D + ++ +E AI++S LGLNP G + +P LT+E + + K+V E K +IR R+ A D +K Sbjct: 5 IKKDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLAVTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKVAIRNVRRDANDKIK 140
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_HAEI8 (Ribosome-recycling factor OS=Haemophilus influenzae (strain 86-028NP) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK 699 +K+ +ME ++ AL ++K+RTGRA P +LD I VE G PL LA V D++TL++ +D + + +E AI++S LGLNP G + +P LT+E + + K+V E K +IR R+ A D +K Sbjct: 5 IKKDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKVAIRNVRRDANDKIK 140
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GLUOX (Ribosome-recycling factor OS=Gluconobacter oxydans GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 50/143 (34.97%), Postives = 88/143 (61.54%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMK 735 +M+ AI +L R+L+ LR+GRASP +L+ + VE G ++PL+ + ++V +++ L+++ +D + +E AI S LGLNP DGQ + IPALT+E + + ++ +E+ K S+R R+ ++ K + S + D MK Sbjct: 15 RMDGAIESLRRDLSGLRSGRASPNLLEPVRVEAYGSEVPLSQVGSIAVPEARMLTVSVWDRTVVGAVERAIRDSGLGLNPSTDGQTVRVPIPALTEERRNELARAASRYAENGKISVRGVRRDGMEQTKALEKKSEISQDDMK 157
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_FLAJ1 (Ribosome-recycling factor OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 50/154 (32.47%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKA-LDMMKKAGSSLPXDSMKRLEKE 750 + E+T M +I L +E +R G+ASP ML + V+ G PL+ ++ +SV D++T+++ P++ N L+ +E AI+ + +G NP +G +I ++P LT+E + + K +ED K IR R+ A D+ K D K E+E Sbjct: 8 ILESTEESMNGSIAHLEKEFLNIRAGKASPAMLGGVFVDYYGSATPLSQVSKISVPDARTITLQPFEKNMLQAIEKAILIANIGFNPMNNGDVIIISVPPLTEERRRDLAKQAKSEAEDAKIGIRNVRKDANTDIKKLEKEGTSEDICKSAEEE 161
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CHLCH (Ribosome-recycling factor OS=Chlorobium chlorochromatii (strain CaD3) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 53/152 (34.87%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKAL-DMMKKAGSSLPXDSMKRLEKESADDI 765 +M+ + A E+T +RTG+A+ +LD + VE G +MPL + VSV D+ TL + +D + + E AI + LGLNP +GQ + +IP LT+E + K+ K ED K S+R R+ + D+ K + + K K+ ADD+ Sbjct: 13 KMKKCLEAFQHEITTIRTGKATTTLLDRVKVEAYGQQMPLKQVGNVSVQDAHTLMVQVWDKSMVSATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEFVKLTKKFGEDSKVSLRNLRRDMIQDIEKLEKAKAVSEDEKNKGKKDADDL 164
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CAMJD (Ribosome-recycling factor OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=frr PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18 Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +Q E ++ AL ++ T LRTG+ + +LDHI V+ G + PLN +A V D+ T+SI P++ LK +E AI ++ +G+NP DG+ + P +T+E + K E K SIR R+ A D +KK Sbjct: 11 TQSEKSLEALKKDFTTLRTGKINTHILDHITVDYYGNQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKK 141 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |