EY728489

Overview
NameEY728489
Unique NameEY728489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPZ (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPM (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M28 GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPG (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPF (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPD (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPC (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRPB (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRP8 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M18 GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRP6 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M6 GN=frr PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
[Close]
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRP3 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M3 GN=frr PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21
Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 
Query:  298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750
            ET   +   +  +LSRE   +R GRA+  +LD I V+  G   PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P  DG  +   IPALT+E  + + K V K  E+ K +IR  R+ A+D  KK      +  D +K LEK+
Sbjct:    7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RRF_STRPZ8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPM8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPG8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPF8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPD8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPC8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPB8.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP88.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP68.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP38.304e-2137.25Ribosome-recycling factor OS=Streptococcus pyogene... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGATAACGAAAAATCATGGCAATGCATCTAAGACGAGCAAT
CTCTAATCGAAACGCAACACTGCTTCTTAGAAATGGAAGCTCTTCTCTTC
AATCACAGCGAAGCTGGTTCCATACTCCCTGCTCCCGCAGTAATGGGTTC
TTTAGGACCCGGTACAGTGATCCAAGTCTTTCGGCTTTCGGCTTCATGCA
AGGTTGTCGTCGAGGATTCGCCAAAGGCAAAAGATCAAAGGATGATTCTG
GTGCTGGAAGTACAGTTGAAATTGTGGATATTGGTCCCACTGTTAAGGAA
ACTACTGTCTCACAGATGGAAGCAGCAATAGTTGCATTGTCACGCGAACT
GACCAAATTAAGAACAGGAAGGGCGTCACCAGGAATGCTTGACCACATTA
TTGTTGAAACTGGTGGAGTGAAGATGCCCTTGAATCATTTAGCTGTTGTT
TCAGTGCTAGATTCTAAGACCTTATCAATTAATCCCTATGATCCAAATAC
CCTGAAAGAGTTAGAGTGCGCCATTGTTTCATCTCCGCTAGGGTTAAATC
CTAAAGTGGATGGGCAACGTTTGATTGCAGCTATTCCAGCATTGACCAAA
GAGCATATCCAGGCAATGTGTAAGGTAGTAGCCAAGACGAGTGAAGATGT
CAAACAAAGTATTAGAAGGTCTCGGCAGAAGGCGTTGGATATGATGAAGA
AAGCAGGTTCAAGTTTGCCCANGGATTCAATGAAGAGATTGGAGAAAGAG
TCAGCGGATGATATCNTGCAGGCAAAAGAGAAGGAAATNATGAAGGCTGA
GTCTGCTGATACATTTCGGATATTATTGAAACGCGTTGGAATATGGACAA
CTGAAANACTATCAAAACCCTTCACTTATCATATCCTGAATCTTNGTATT
TTTCCTAGTCATGAGAGGCNAGGTAATGC
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