EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRP1 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M1 GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 57/153 (37.25%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 ET + + +LSRE +R GRA+ +LD I V+ G PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 7 ETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRGC (Ribosome-recycling factor OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 + E +M + L+RE +R GRA+ +LD I VE GV+ PLN +A +++ +++ L + P+D ++LK++E AI +S LG+ P DG + IPALT+E + + K V K E+ K +IR R+ A+D KK + D +K LEK+ Sbjct: 5 IVEKAKERMSHSHQNLAREFGAVRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERAINASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKIGENAKIAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GEOSF (Ribosome-recycling factor OS=Geobacter sp. (strain FRC-32) GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 55/152 (36.18%), Postives = 92/152 (60.53%), Query Frame = 1 Query: 310 SQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKESAD 759 S M+ I +L +E K+RTGRAS +LD I V+ G PLN +A ++V + +T+++ P+D + +E AI+++ LGL P DG+ + +P LT+E + + K + K +ED K ++R R++A+D +KK + D +KR EK+ D Sbjct: 11 SHMDKTIDSLRKEYQKVRTGRASTSLLDEIKVDFYGTLSPLNQVATLAVPEPRTITLQPWDAKMIPPIEKAIMNANLGLTPANDGKLIRLNLPPLTEERRKEIVKQLKKFAEDAKVAVRNIRREAIDDLKKLEKEKKISEDDLKRAEKDVQD 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESVV (Ribosome-recycling factor OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 56/148 (37.84%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +ME AI AL RE ++LRTGRAS ++D I V+ G P++ +A V+V DS+ ++I P+D N +E AI+ S LGLNP DG+ + IP LT+E + + K+ K +E+ K ++R R+ A + +KK L D +++ +++ Sbjct: 13 RMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQED 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESVH (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 56/148 (37.84%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +ME AI AL RE ++LRTGRAS ++D I V+ G P++ +A V+V DS+ ++I P+D N +E AI+ S LGLNP DG+ + IP LT+E + + K+ K +E+ K ++R R+ A + +KK L D +++ +++ Sbjct: 13 RMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQED 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BRAJA (Ribosome-recycling factor OS=Bradyrhizobium japonicum GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKR 738 +M+ A+ +L EL LRTGRAS MLD + VE G MPLN LA VSV + + +S+ +D + +K +E AIV S LGL+P +GQ L IP L +E + + KV K +E K + R R+ LD++KK + D KR Sbjct: 15 RMQGAVQSLKHELGGLRTGRASASMLDPVQVEAYGSHMPLNQLATVSVPEPRLISVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEAAKVAARHVRRDGLDVLKKLEKNHEMSEDDQKR 158
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACWK (Ribosome-recycling factor OS=Bacillus weihenstephanensis (strain KBAB4) GN=frr PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.304e-21 Identity = 55/141 (39.01%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +E+ K ++R R+ + D +KK Sbjct: 1 MGQQVLKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDSNDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRS7 (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 ET + + +L+RE +R GRA+ +LD I V+ G PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P DG + IPALT+E + + K V K E K SIR R+ A+D KK + D +K LEK+ Sbjct: 7 ETAKERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STREM (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 ET + + +L+RE +R GRA+ +LD I V+ G PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P DG + IPALT+E + + K V K E K SIR R+ A+D KK + D +K LEK+ Sbjct: 7 ETAKERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_STRE4 (Ribosome-recycling factor OS=Streptococcus equi subsp. equi (strain 4047) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 298 ETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 ET + + +L+RE +R GRA+ +LD I V+ G PLN LA ++V +++ L I+P+D +++K++E A+ +S LG+ P DG + IPALT+E + + K V K E K SIR R+ A+D KK + D +K LEK+ Sbjct: 7 ETAKERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKD 159 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |