EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_PSEPW (Ribosome-recycling factor OS=Pseudomonas putida (strain W619) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 60/158 (37.97%), Postives = 91/158 (57.59%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSSLPXDSMKRLEKESADDI 765 +K+ +M +I AL R L +RTGRA P +LD + V G +MPLN +A VSV D++TL I +D N +E AI++S LGLNP G + +PALT+E + K + +ED K ++R R+ AL +KK + + + E+ +AD+I Sbjct: 5 IKKDAQDRMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSEMPLNQVAAVSVEDARTLKIVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASAVAEDAKVAVRNVRRDALADLKKL--TKDKEISEDEERRAADEI 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_MOOTA (Ribosome-recycling factor OS=Moorella thermoacetica (strain ATCC 39073) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 55/148 (37.16%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMK--KAGSSLPXDSMKRLEKE 750 +M+ A+ L REL LR GRA+P +L+ ++V G P+N LA VS +++ L I P+D N L E+E AI+ S LGL P DG + IP LT+E + KV K +E+ + +R +R++A D +K + D +KR +++ Sbjct: 12 KMKKAVEGLRRELASLRAGRANPALLEKVLVSYYGTPTPVNQLATVSSPEARLLVIQPWDRNILPEIEKAILKSDLGLTPSSDGTVIRITIPQLTEERRSELVKVARKKAEEFRVMVRNARREANDKLKASEKNKEASEDEVKRAQEK 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESHY (Ribosome-recycling factor OS=Desulfitobacterium hafniense (strain Y51) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 I +KE +M A+ AL RE +R GRA+P MLD I VE G + P+N LA +SV + + L+I P+D ++L +E AI+ S LGLNP DG + IP LT E + K V K +ED + ++R R+ + D +KK + D +KR + + Sbjct: 2 INDVLKEAE-DRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRVAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DESHD (Ribosome-recycling factor OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 I +KE +M A+ AL RE +R GRA+P MLD I VE G + P+N LA +SV + + L+I P+D ++L +E AI+ S LGLNP DG + IP LT E + K V K +ED + ++R R+ + D +KK + D +KR + + Sbjct: 2 INDVLKEAE-DRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSRVAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDD 159
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_DEIRA (Ribosome-recycling factor OS=Deinococcus radiodurans GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 1 Query: 289 TVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSSLPXDSMKRLEKE 750 +++ T +M AI A L+ LRTGRA+PG+L I+V+ G +MP++ +A ++ D +TL I P+D L +E AI S LGLNP G + ++P LT+E + + K +ED + ++R R+ ALD +KK L D +KR E + Sbjct: 6 SIQADTREKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASITTPDPRTLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEDARIAVRNLRKHALDEVKKV-EGLGEDEIKRGEAD 158
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACHK (Ribosome-recycling factor OS=Bacillus thuringiensis subsp. konkukian GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 55/141 (39.01%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +E+ K ++R R+ D +KK Sbjct: 1 MGQQVLKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACCZ (Ribosome-recycling factor OS=Bacillus cereus (strain ZK / E33L) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 55/141 (39.01%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +E+ K ++R R+ D +KK Sbjct: 1 MGQQVLKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACC3 (Ribosome-recycling factor OS=Bacillus cereus (strain 03BB102) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 55/141 (39.01%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +E+ K ++R R+ D +KK Sbjct: 1 MGQQVLKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACC2 (Ribosome-recycling factor OS=Bacillus cereus (strain G9842) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 55/141 (39.01%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +E+ K ++R R+ D +KK Sbjct: 1 MGQQVLKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BACC0 (Ribosome-recycling factor OS=Bacillus cereus (strain AH820) GN=frr PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 55/141 (39.01%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 280 IGPTVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 +G V +++ +ME A+ A SREL +R GRAS +LD + V+ G P+ LA ++V +++ L I PYD ++ ++E AI+ + LGLNP DG + A PALT+E + + KVV K +E+ K ++R R+ D +KK Sbjct: 1 MGQQVLKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKK 141 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |