EY728489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_GRAFK (Ribosome-recycling factor OS=Gramella forsetii (strain KT0803) GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 55/160 (34.38%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 292 VKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKAGSSLPXDSMKRLEKESADDIXQ 771 + E ME AI L ++L+ +R G+ASP ML ++VE G + PL +A V+ D++TLSI P++ + + E+E I+ + LG NP +G+ +I +P LT+E + + K +ED K +R R++A+ +KKA D + L K S D++ + Sbjct: 7 ILEEAKEGMEKAITHLKKQLSNIRAGKASPSMLGSVMVEYYGSQTPLQQVANVNTPDARTLSIQPFEKSLITEIERGIMLANLGFNPMNNGESVIINVPPLTEERRKQLSKQAKAEAEDAKVGVRNDRKQAMQELKKA------DISEDLLKSSEDEVQE 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CORDI (Ribosome-recycling factor OS=Corynebacterium diphtheriae GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 58/158 (36.71%), Postives = 88/158 (55.70%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK------AGSSLPXDSMKRLEKESADDIXQ 771 M ++ EL +RTGRA+P M + +I + GV P+ +A +SV +++ L I PY+ + + E+E AI +S LG+NP DGQ L IP LT+E + M K+ ED K +IR R+K +D +KK AG + K L+K +A + Q Sbjct: 13 MNTSVERTRDELVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVPEARMLLIKPYEMSMMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMAKLAKSKGEDGKIAIRNVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKVTAKYVAQ 170
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CLOBM (Ribosome-recycling factor OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK-AGSSLPXDSMKRLEKE 750 +M +IVAL REL ++ GRA+P MLD I E G PLN LA +SV +++ L I P+D +++ +E AI+ S LGLNP DG + IP LT+E + + K V KT E+ K +IR R+ D +K + D +K+ E + Sbjct: 12 KMGKSIVALKRELASMKAGRANPAMLDRIDAEYYGSMTPLNQLANISVPEARVLLIQPWDKSSMGAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEETKVAIRSIRRDCNDDVKNLKKDDVSEDDIKKTEDD 158
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CAUSK (Ribosome-recycling factor OS=Caulobacter sp. (strain K31) GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 56/148 (37.84%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA--GSSLPXDSMKRLEKE 750 +M+ A+++L + LRTGRAS G+LD I+V G + LN +A +SV + + +++N +D + +E AI +S LGLNP V+G L IP LT+E + + K+ K +E K ++R R+ A D +KKA S + D +K++E E Sbjct: 15 RMDKAVLSLKEDFAGLRTGRASSGLLDQIMVNAYGSMVQLNTVASISVPEPRQINVNIWDKGVVSAVEKAIRNSDLGLNPVVEGNNLRIPIPPLTEERRKDLVKIAGKYAEAQKVAVRNIRRDANDDLKKAEKASVISEDELKKMETE 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CAUCR (Ribosome-recycling factor OS=Caulobacter crescentus GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA--GSSLPXDSMKRLEKE 750 +M+ A+ AL E LRTGRAS +LD ++VE G PLN +A VSV + + ++++ +D + +E AI +S LGLNP V+GQ L IP LT+E + + K+ K +E K ++R R+ A D +KKA ++ D K++E E Sbjct: 15 RMDKAVSALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQINVSVWDRGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQKIAVRNVRRDANDDLKKAEKDGAIAEDERKKMETE 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_CAUCN (Ribosome-recycling factor OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKKA--GSSLPXDSMKRLEKE 750 +M+ A+ AL E LRTGRAS +LD ++VE G PLN +A VSV + + ++++ +D + +E AI +S LGLNP V+GQ L IP LT+E + + K+ K +E K ++R R+ A D +KKA ++ D K++E E Sbjct: 15 RMDKAVSALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQINVSVWDRGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQKIAVRNVRRDANDDLKKAEKDGAIAEDERKKMETE 162
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_BREBN (Ribosome-recycling factor OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 289 TVKETTVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK 702 TV +M AI AL R+L+ LR GRA+P MLD + V+ G P++ LA +SV + + L+I P+D LKE++ A+ S LG++P DG + IP LT+E + + K+ K E+ K +IR R+ A D +KK Sbjct: 4 TVLNDMEDRMNKAINALKRDLSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISVPEPRMLTIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGKGGEEAKVAIRNIRRDANDEIKK 141
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_AZOC5 (Ribosome-recycling factor OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=frr PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +M A+ +L +EL LRTGRAS +L+ I V+ G MPL +A VSV + + LS+ +D + +E AI S LGLNP +GQ L IP L +E + + KV K +E + ++R R+ +D++KK S++ D M+RL K+ Sbjct: 13 RMAGAVTSLKQELGGLRTGRASASLLEPITVDAYGANMPLAQVATVSVPEPRLLSVQVWDRGMVNAVEKAIRDSNLGLNPNTEGQTLRIRIPELNEERRKELVKVAHKYAEAARVAVRHVRRDGMDLLKKLEKDSAISSDDMERLSKD 160
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_SYNP2 (Ribosome-recycling factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=frr PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20 Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 316 MEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 M+ I A R LRTGRAS +LD I VE G + PL LA +S DS T+ I P+D +L ++E AI S LGL P DG + IP LTKE Q + K K +E+ K ++R R+ A+D ++K S + D + L+ + Sbjct: 10 MQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVALRNIRRDAIDDVRKQEKNSDISEDESRSLQDD 156
BLAST of EY728489 vs. ExPASy Swiss-Prot
Match: RRF_RHOPS (Ribosome-recycling factor OS=Rhodopseudomonas palustris (strain BisB5) GN=frr PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20 Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 313 QMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECAIVSSPLGLNPKVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMMKK--AGSSLPXDSMKRLEKE 750 +M A AL EL LRTGRAS ML+ + V+ G MPLN +A VSV + + LS+ +D + +K +E AIV S LGL+P +GQ L IP L ++ + + KV K +E + ++R R+ LD++KK + D KRL+ E Sbjct: 14 RMHGASQALQHELGGLRTGRASASMLEPVQVDAYGTHMPLNQVATVSVPEPRLLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKYAEAARVAVRHVRRDGLDIIKKLEKAHEISEDDQKRLDHE 161 The following BLAST results are available for this feature:
BLAST of EY728489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728489 ID=EY728489; Name=EY728489; organism=Citrus sinensis; type=EST; length=929bpback to top |