EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ANADE (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLG+ VDD  A+ II+QLLFL++ED  KDI L INSPGGSVT+G+ IYD M+  K  V TICLG AASMGAFLLA G  GKR+ +PNAR MIH   G    Q+   E      +  + K ++I++R T + +++IE DT RD FM A EAK  G
Sbjct:   21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQLSGGFQGQATDIEIQAKEALRLKAKLNEIMARHTRQPIERIERDTERDYFMSAGEAKEYG 186          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ANAD2 (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLG+ VDD  A+ II+QLLFL++ED  KDI L INSPGGSVT+G+ IYD M+  K  V TICLG AASMGAFLLA G  GKR+ +PNAR MIH   G    Q+   E      +  + K ++I++R T + +++IE DT RD FM A EAK  G
Sbjct:   21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQLSGGFQGQATDIEIQAKEALRLKAKLNEIMARHTRQPIERIERDTERDYFMSAGEAKEYG 186          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 87/166 (52.41%), Postives = 113/166 (68.07%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AED +KDI+L INSPGGSVTAGM IYD M+    DV TIC GLAASMGAFLL+ G +GKR  +P+AR MIH   G    Q+   E      +  +   + +L++ TG+ +++IE+DT RD FM   EAK  G
Sbjct:   53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYG 218          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 87/166 (52.41%), Postives = 113/166 (68.07%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AED +KDI+L INSPGGSVTAGM IYD M+    DV TIC GLAASMGAFLL+ G +GKR  +P+AR MIH   G    Q+   E      +  +   + +L++ TG+ +++IE+DT RD FM   EAK  G
Sbjct:   53 DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYG 218          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALPK (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A (strain AKU_12601) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 85/168 (50.60%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAG+ IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALPA (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 85/168 (50.60%), Postives = 119/168 (70.83%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAG+ IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_DESOH (ATP-dependent Clp protease proteolytic subunit OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 83/166 (50.00%), Postives = 113/166 (68.07%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RI+F+GS +DD TA+ +I+QLLFL++ED  KDI   INSPGG V+AGM IYD M+  K+D+ T+C+G AASMGAFLLAAG KGKR+ +PN+R MIH   G    Q++         +  +   ++IL+  TGK ++QI++DT RD FM   EAK  G
Sbjct:   19 DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEAKAYG 184          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ACISJ (ATP-dependent Clp protease proteolytic subunit OS=Acidovorax sp. (strain JS42) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 86/168 (51.19%), Postives = 118/168 (70.24%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVL-PQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  +V+D TA+ +++QLLFL++E+  KDI   INSPGGSVTAGM IYD M+  K DV T+C G AASMGAFLLAAG KGKRY +PN++ MIH   G    Q+   E H   RD+L  + + ++IL+  TG+ +++++ DT RD FM A EAK+ G
Sbjct:   27 DIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNSKIMIHQVLGGARGQATDIEIHA--RDILRTKEQMNRILAERTGQPIEKVKADTERDYFMTADEAKDYG 192          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP2_BACSK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 86/166 (51.81%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS VDD  A+ I++Q+LFL AED +KDI L INSPGGS+TAGM IYD M+  K DV TIC+G+AASMGAFLL AG KGKR  +PN+  MIH   G    Q+   E    R +  + K ++I++  +G+  ++I  DT RDNFM A +AK  G
Sbjct:   19 DIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPLGGMQGQAADMEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAKEYG 184          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LLR+RI+FLG QVD   A+ I++QLLFLDAED +KDI L INSPGGSVTAGMGI+D MK  + DV TIC GLAASMGAFLL+AG KGKR  +P++R MIH   G    Q+   E      +  + + +  L+  TG+ +++I  DT RD FM   EAK+ G
Sbjct:   18 DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYG 183          
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_ANADE1.801e-3853.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANAD21.801e-3853.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNP61.801e-3852.41ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNE71.801e-3852.41ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_SALPK2.352e-3850.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALPA2.352e-3850.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESOH2.352e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ACISJ2.352e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_BACSK2.352e-3851.81ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_ANASP2.352e-3853.01ATP-dependent Clp protease proteolytic subunit 1 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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