EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11750 contig Csv1_Contig11750:1..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_GEOKA (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus kaustophilus GN=clpP PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RI+FLGS +DD  A+ I+SQLLFL AED  KDI L INSPGGS+TAG+ IYD M+  K DV TIC+G+AASMGAFLLAAG KGKR+ +PN+  MIH   G    Q+   E    R +  + K ++ILS  TG+ ++ IE DT RDNFM A +A   G
Sbjct:   19 DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAMEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STACT (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus carnosus (strain TM300) GN=clpP PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.332e-41
Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL A+D++KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K +KIL+  TG++++QIE DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.273e-41
Identity = 91/166 (54.82%), Postives = 114/166 (68.67%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLGS +DD  A+ +I+QLLFL+AED  KDI L INSPGGS+TAGM IYD ++  + DV TIC+GLAASMGAFLLAAG KGKRY +PNA  MIH   G    Q+   E    R +  +   +KIL+  TG+ +++I+ DT RD FM A EAK  G
Sbjct:   20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKEYG 185
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_GEOSW (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus sp. (strain WCH70) GN=clpP PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.273e-41
Identity = 90/166 (54.22%), Postives = 114/166 (68.67%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL AED +KDI L INSPGGS+TAG+ IYD M+  K DV TIC+G+AASMGAFLLAAG KGKR+ +PN+  MIH   G    Q+   E    R +  + K ++IL+  TG+ V+ IE DT RDNFM A +A+  G
Sbjct:   19 DIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKAQEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.877e-41
Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL A+D++KDI L INSPGGSVTAGM IYD M+  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K ++IL+  TG+ +++IE DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BACA2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpP PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.877e-41
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+AED +KDI + INSPGGS+TAGM IYD M+  K  V TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+   E    R +L + K +K+L+  TG+ ++ IE DT RDNF  A EA   G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_BACLD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.877e-41
Identity = 91/166 (54.82%), Postives = 112/166 (67.47%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+AED +KDI + INSPGGS+TAGM IYD M+  K  V TIC G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+   E    R +  + K +KIL+  TG+ ++ IE DT RDNF  A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STAHJ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpP PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.612e-41
Identity = 89/166 (53.61%), Postives = 115/166 (69.28%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL A+DS+KDI L INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG KGKR+ +PNA  MIH   G    Q+   E      +  + K +KIL+  TG+++++I+ DT RDNF+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBL (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L INSPGGS+T+GM IYD M+  K DV TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+        R +  + K + ILS  TGK ++Q+ELDT RD+F+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBK (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Okra / Type B1) GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L INSPGGS+T+GM IYD M+  K DV TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+        R +  + K + ILS  TGK ++Q+ELDT RD+F+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYG 184
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_GEOKA1.020e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STACT1.332e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SYNWW2.273e-4154.82ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_GEOSW2.273e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MACCJ3.877e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BACA23.877e-4154.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_BACLD3.877e-4154.82ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_STAHJ6.612e-4153.61ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBL1.473e-4054.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBK1.473e-4054.22ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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