EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBJ (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Kyoto / Type A2) GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L INSPGGS+T+GM IYD M+  K DV TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+        R +  + K + ILS  TGK ++Q+ELDT RD+F+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L INSPGGS+T+GM IYD M+  K DV TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+        R +  + K + ILS  TGK ++Q+ELDT RD+F+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOB1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L INSPGGS+T+GM IYD M+  K DV TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+        R +  + K + ILS  TGK ++Q+ELDT RD+F+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BACSU (ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis GN=clpP PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 90/166 (54.22%), Postives = 112/166 (67.47%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL AED +K+I L INSPGGS+TAGM IYD M+  K  V TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+   E    R +L + K +K+L+  TG+ ++ IE DT RDNF  A EA   G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ALKMQ (ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus metalliredigens (strain QYMF) GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.473e-40
Identity = 87/166 (52.41%), Postives = 115/166 (69.28%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RIIFLG +++D+TA  +++QLLFL+AED  KDI++ INSPGGS+TAGM IYD M   K DV TIC+G+AASMGAFLLAAG KGKR+ +PNA  MIH   G    Q+        R V  +   +KIL   TG+ +++++ DT RD FM+A EAK  G
Sbjct:   19 DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDIQIYINSPGGSITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMIHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBM (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=clpP PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.282e-40
Identity = 89/166 (53.61%), Postives = 112/166 (67.47%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L INSPGGS+T+GM IYD M+  K DV TIC+G+AASMGAFLL AG KGKRY +PN+  MIH   G    Q+        R +  + K + ILS  TGK ++Q+ELDT RD+F+ A EAK  G
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEVMIHQPLGGFQGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BACP2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus pumilus (strain SAFR-032) GN=clpP PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.282e-40
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+AED +KDI + INSPGGS+TAGM IYD M+  K  V TIC+G+AASMGAFLLAAG KGKRY +PN+  MIH   G    Q+   E    R +  + K +++L+  TG+ ++ IE DT RDNF  A EA   G
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEALQYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.286e-40
Identity = 88/166 (53.01%), Postives = 114/166 (68.67%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLGS +DD  A+ +I+Q+LFL+AED  KDI L INSPGGS++AGM I+D M+  + DV TIC+GLAASMGAFLLAAG KGKR+ +PN+  MIH   G    Q+   E    R +  +   ++ILS  TGK ++QI  DT RD+FM A EA+  G
Sbjct:   20 DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTAREAREYG 185
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLONN (ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi (strain NT) GN=clpP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.286e-40
Identity = 88/166 (53.01%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLG +V+D+TA  +++QLLFL+AED  KDI L INSPGGS+TAGM IYD M+  K DV TIC+G+AASMGAFLL AG KGKR+ +PN+  MIH   G    Q+        R +  + K + ILS  TG+ ++ I+ D  RDNFM+A EAK  G
Sbjct:   19 DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP3_ANAVT (ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP3 PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.598e-40
Identity = 89/166 (53.61%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LLR+RIIFLG+ +DD  A+ I++QLLFLDAEDS+KDI+L INSPGGSV AGM IYD ++  + DV TIC GLAASMGAFLL AG KGKR  +P++R MIH   G    Q+   E      +  + + +++L+  TG+ +++IE DT RD FM A EAKN G
Sbjct:   27 DIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMIHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAKNYG 192
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_CLOBJ1.473e-4054.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBH1.473e-4054.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOB11.473e-4054.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BACSU1.473e-4054.22ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ALKMQ1.473e-4052.41ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBM3.282e-4053.61ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BACP23.282e-4053.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_MOOTA4.286e-4053.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLONN4.286e-4053.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_ANAVT5.598e-4053.61ATP-dependent Clp protease proteolytic subunit 3 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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