EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_MYCBO (ATP-dependent Clp protease proteolytic subunit 1 OS=Mycobacterium bovis GN=clpP1 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.079e-30
Identity = 72/162 (44.44%), Postives = 104/162 (64.20%), Query Frame = 2
Query:  347 LLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTGW 832
            LL +RIIFLGS+V+D  A+ + +Q+L L AED+ KDI L INSPGGS++AGM IYD M L   D+ T  +G+AASMG FLLAAG KGKRY +P+AR ++H   G     +        +  + + +  ++ +  TG+ +++IE D+ RD +  A EA   G+
Sbjct:   24 LLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGF 185          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STRP7 (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain 70585) GN=clpP PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVL--PQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTGW 832
            D  + LL+ RII L   V+D  A+ +I+QLLFLDA+DS KDI L +N+PGGSV+AG+ I D M   KADV TI +G+AASMG  + ++G KGKR+ +PNA  MIH   G     + + +     + L   +   +KIL+  +G++++++  D  RDN+M A E    G+
Sbjct:   17 DIYSRLLKDRIIMLTGPVEDSMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGF 185          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_EHRCJ (ATP-dependent Clp protease proteolytic subunit OS=Ehrlichia canis (strain Jake) GN=clpP PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 73/168 (43.45%), Postives = 109/168 (64.88%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RIIF+   ++D  A  +++QL+FL+AE+ +K+I + INSPGG VTAG+ IYD M+  K  V T+CLG AASMG+ LLAAG  G RY +PN+R MIH   G    Q+   E H   +++L  + + + I  + TG+ + ++  +  RDNFM A +AK+ G
Sbjct:   19 DIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEICMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRIMIHQPSGGFQGQATDIEIHA--KEILDIKSRLNDIYVKHTGRDLPEVVANMERDNFMRAEKAKDFG 184          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLTR (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia trachomatis GN=clpP2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 71/163 (43.56%), Postives = 103/163 (63.19%), Query Frame = 2
Query:  329 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEA 817
            +D  + LL+ RI+ +G ++ +  A+ +I+QLLFL +ED  KDI++ INSPGG +TAG+ IYD ++    DV T C+G AASMGA LL+AG KGKRY +P++R MIH   G     S   +      +  +     IL+  TG++V++I  D+ RD FM A EA
Sbjct:   18 MDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGAEEA 180          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP2_CHLTA (ATP-dependent Clp protease proteolytic subunit 2 OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 71/163 (43.56%), Postives = 103/163 (63.19%), Query Frame = 2
Query:  329 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEA 817
            +D  + LL+ RI+ +G ++ +  A+ +I+QLLFL +ED  KDI++ INSPGG +TAG+ IYD ++    DV T C+G AASMGA LL+AG KGKRY +P++R MIH   G     S   +      +  +     IL+  TG++V++I  D+ RD FM A EA
Sbjct:   18 MDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDIQIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGAEEA 180          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_STRAW (ATP-dependent Clp protease proteolytic subunit 1 OS=Streptomyces avermitilis GN=clpP1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 2
Query:  314 PKFEELDT---------TNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            P+ EE DT            LL QRI+ LG+QVD+++A+ + +QLL L AEDS+ DI L INSPGGSVTAG+ IYD M+L   DV T+ +G AASMG FLL+ G  GKR+ +PNAR M+H         +   E         +   ++I +  TG++ + I  D  RD +  A +AK  G
Sbjct:   14 PRAEEGDTPPSRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLLLLSAEDSRTDISLYINSPGGSVTAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGAAGKRFALPNARIMMHQPSAGIGGTTADIEIQAENLEFTKKAIERITAEHTGQSEETISRDGDRDRWFTAEQAKEYG 194          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_CHLFF (ATP-dependent Clp protease proteolytic subunit 1 OS=Chlamydophila felis (strain Fe/C-56) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.021e-30
Identity = 72/167 (43.11%), Postives = 105/167 (62.87%), Query Frame = 2
Query:  329 LDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            +D  + LL+ RI+ +G ++ +  A+ +I+QLLFL +ED +KDI++ INSPGG +TAG+ IYD ++    DV T C+G AASMGA LL+AG KGKRY +P++R MIH   G     S   +      +  +     ILS  TG+ V++I  D+ RD FM A +A + G
Sbjct:   18 MDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPQKDIKVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEDAISYG 184          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STRZT (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=clpP PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.252e-30
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVL--PQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTGW 832
            D  + LL+ RII L   V+D  A+ +I+QLLFLDA+DS KDI L +N+PGGSV+AG+ I D M   KADV TI +G+AASMG  + ++G KGKR+ +PNA  MIH   G     + + +     + L   +   +KIL+  +G++++++  D  RDN+M A E    G+
Sbjct:   17 DIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGF 185          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STRZP (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain P1031) GN=clpP PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.252e-30
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVL--PQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTGW 832
            D  + LL+ RII L   V+D  A+ +I+QLLFLDA+DS KDI L +N+PGGSV+AG+ I D M   KADV TI +G+AASMG  + ++G KGKR+ +PNA  MIH   G     + + +     + L   +   +KIL+  +G++++++  D  RDN+M A E    G+
Sbjct:   17 DIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAHETLEYGF 185          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_STRZJ (ATP-dependent Clp protease proteolytic subunit OS=Streptococcus pneumoniae (strain JJA) GN=clpP PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.252e-30
Identity = 72/169 (42.60%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVL--PQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTGW 832
            D  + LL+ RII L   V+D  A+ +I+QLLFLDA+DS KDI L +N+PGGSV+AG+ I D M   KADV TI +G+AASMG  + ++G KGKR+ +PNA  MIH   G     + + +     + L   +   +KIL+  +G++++++  D  RDN+M A E    G+
Sbjct:   17 DIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGF 185          
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP1_MYCBO3.079e-3044.44ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_STRP74.021e-3042.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EHRCJ4.021e-3043.45ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_CHLTR4.021e-3043.56ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_CHLTA4.021e-3043.56ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_STRAW4.021e-3042.54ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_CHLFF4.021e-3043.11ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_STRZT5.252e-3042.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRZP5.252e-3042.60ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STRZJ5.252e-3042.60ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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