EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALTI (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhi GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALSV (ATP-dependent Clp protease proteolytic subunit OS=Salmonella schwarzengrund (strain CVM19633) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALNS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella newport (strain SL254) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALHS (ATP-dependent Clp protease proteolytic subunit OS=Salmonella heidelberg (strain SL476) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALEP (ATP-dependent Clp protease proteolytic subunit OS=Salmonella enteritidis PT4 (strain P125109) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SALCH (ATP-dependent Clp protease proteolytic subunit OS=Salmonella choleraesuis GN=clpP PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 85/166 (51.20%), Postives = 113/166 (68.07%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII L  +++D+TA  +++Q+LFL+AED  KDI+L INSPGGSVTAG  IYD M+  K DV TIC+G+AASMGAFLLAAG KGKR+ +PN+  MIH   G    Q+   +    + +  + K ++ILS  TG+  ++IE DT RD FM A EAK  G
Sbjct:   19 DIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEAKAYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_THEEB (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.083e-39
Identity = 92/172 (53.49%), Postives = 113/172 (65.70%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQ------VDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LLR+RIIFLG        +DD  AD I++QLLFLDAED +KDI L INSPGGSVTAGM IYD MK  + DV T+C GLAASMGAFLL+ G  GKR  +PNAR MIH   G    Q+   E      +  + K +++LS+ TG+ +++IE DT RD FM A EAK  G
Sbjct:   44 DIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTERDFFMSAEEAKAYG 215
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ALKOO (ATP-dependent Clp protease proteolytic subunit OS=Alkaliphilus oremlandii (strain OhILAs) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.056e-38
Identity = 85/167 (50.90%), Postives = 116/167 (69.46%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RIIFL  +V+D TA  +++QLLFL++ED  KDI+L INSPGGS+TAGM IYD M   K DV TIC+G+AASMGAFLL AG KGKR+ +PNA  MIH   G    Q+     HT+ R +  +   +KI++  TG+ +++++ DT RD FM+A EA+  G
Sbjct:   19 DIYSRLLKERIIFLSDEVNDATASLVVAQLLFLESEDPDKDIQLYINSPGGSITAGMAIYDTMNYIKPDVSTICIGMAASMGAFLLTAGQKGKRFALPNAEIMIHQPLGGTRGQAEDIRIHTE-RILKMRETLNKIIAERTGQPLEKVQKDTDRDFFMEAEEARAYG 184
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ALCBS (ATP-dependent Clp protease proteolytic subunit OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=clpP PE=3 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.056e-38
Identity = 84/166 (50.60%), Postives = 114/166 (68.67%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IF+  QV+D  A+ I++Q+LFL++E+  KDI L INSPGGSVTAGM IYD M+  K DV T+C+G AASMGAFLL AG  GKR+ +PNAR MIH   G    Q++  E      +  +G+ + +L+  TG+ ++Q+E DT RDNFM A EAK  G
Sbjct:   29 DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFALPNARVMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFMSADEAKEYG 194
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SALTI8.083e-3951.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALSV8.083e-3951.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALNS8.083e-3951.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALHS8.083e-3951.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALEP8.083e-3951.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SALCH8.083e-3951.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOTH8.083e-3951.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_THEEB8.083e-3953.49ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_ALKOO1.056e-3850.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ALCBS1.056e-3850.60ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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