EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SHISS (ATP-dependent Clp protease proteolytic subunit OS=Shigella sonnei (strain Ss046) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SHIFL (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SHIF8 (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri serotype 5b (strain 8401) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SHIDS (ATP-dependent Clp protease proteolytic subunit OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_SHIBS (ATP-dependent Clp protease proteolytic subunit OS=Shigella boydii serotype 4 (strain Sb227) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOUT (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain UTI89 / UPEC) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOLI (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain K12) GN=clpP PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOLC (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOL6 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O6 GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOL5 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_SHISS1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIFL1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIF81.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIDS1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIBS1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOUT1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOLI1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOLC1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOL61.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOL51.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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