EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOK1 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O1:K1 / APEC GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECOHS (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O9:H4 (strain HS) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECO57 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O157:H7 GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ECO24 (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/168 (51.19%), Postives = 119/168 (70.83%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVLP-QGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I++Q+LFL+AE+ +KDI L INSPGG +TAGM IYD M+  K DV TIC+G AASMGAFLL AG KGKR+C+PN+R MIH   G    Q+   E H   R++L  +G+ +++++  TG++++QIE DT RD F+ A EA   G
Sbjct:   32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHA--REILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURPS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 207
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURP6 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 668) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 207
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURP1 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1710b) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 197
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURP0 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1106a) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 207
[Close]
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURMS (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain SAVP1) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2 
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 207
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_ECOK11.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOHS1.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECO571.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECO241.379e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURTA1.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURPS1.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP61.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP11.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURP01.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURMS1.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
back to top