EY728481

Overview
NameEY728481
Unique NameEY728481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURMA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   32 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 197          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURM9 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10229) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 207          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_BURM7 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei (strain NCTC 10247) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++RI+F+  +V+D TA+ +++QLLFL++E+  KDI L INSPGGSV+AGM IYD M+  K DV T+C+GLAASMGAFLLA+G KGKRY +PNAR MIH   G    Q++  E      +  + + + +L+  TG+ V++I  DT RDNFM + +AK  G
Sbjct:   42 DIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYG 207          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus halodurans GN=clpP1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.379e-38
Identity = 86/166 (51.81%), Postives = 113/166 (68.07%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RII LG+ +DD  A+ I++QLLFL AED  KDI L INSPGGS+TAGM IYD M+  K +V TIC+G+AASMGAFLLAAG KGKR+ +PN+  MIH   G    Q++  E    R +  +   ++IL+  TG+ ++QI  DT RDNFM A +A+  G
Sbjct:   19 DIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYG 184          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ I +QLLFL+AE+  KDI L INSPGGSVTAGM IYD M+  KADV T C+G A SMGAFLLA G KGKR+C+PN+R MIH   G    Q++  E      +  + + +++L+  TG++++ IE DT RDNFM A  A   G
Sbjct:   35 DIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSAPRAVEYG 200          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_METFK (ATP-dependent Clp protease proteolytic subunit OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 85/159 (53.46%), Postives = 111/159 (69.81%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDA 808
            D  + LL++RIIFL   V+D TA+ +++QLLFL+AE+  KDI   INSPGGSVTAGMGIYD M+  K DV T+C+G AASMGA LLAAG +GKR+C+PN+R MIH   G    Q++  E      +  + K + IL+  TG+ V++I LDT RDNFM A
Sbjct:   35 DIYSRLLKERIIFLVGPVNDATANLVVAQLLFLEAENPDKDIYFYINSPGGSVTAGMGIYDTMQFVKPDVSTLCVGQAASMGALLLAAGAQGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFLREKLNHILASHTGQPVEKIALDTDRDNFMSA 193          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_EUBE2 (ATP-dependent Clp protease proteolytic subunit OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 82/162 (50.62%), Postives = 108/162 (66.67%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEA 817
            D  + LL+ RIIFLG +V D++A+ +++Q+LFL+AED  KDI   INSPGGSV+AG  IYD M+  K DV TIC+G+AASMGAFLL+ G KGKR  +PNA  MIH   G    Q           +  + K ++IL+  TGK+V++I  DT RDN+M A EA
Sbjct:   19 DIYSRLLKDRIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDIHFYINSPGGSVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEIMIHQPSGGARGQETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEA 180          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_DIAST (ATP-dependent Clp protease proteolytic subunit OS=Diaphorobacter sp. (strain TPSY) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 86/168 (51.19%), Postives = 118/168 (70.24%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYE-HTD*RDVL-PQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  +V+D TA+ +++QLLFL++E+  KDI   INSPGGSVTAGM IYD M+  K DV T+C G AASMGAFLLAAG KGKRY +PN++ MIH   G    Q+   E H   RD+L  + + ++IL+  TG+ +++++ DT RD FM A EAK+ G
Sbjct:   27 DIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKRYSLPNSKIMIHQVLGGARGQATDIEIHA--RDILRTKDQMNRILAERTGQPIEKVKADTERDYFMTADEAKDYG 192          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_COLP3 (ATP-dependent Clp protease proteolytic subunit OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 83/166 (50.00%), Postives = 112/166 (67.47%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL++R+IFL  QV+D  A+ II+QLLFL++E   KDI L INSPGGSVTAGM IYD MK  K ++ T+C+G AASMGAFLL+ G KGKRYC+PNAR MIH   G    Q++ +E      +  + K +K+++  TG+ + ++  DT RDNF+ A  A   G
Sbjct:   43 DIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKEILFIKDKLNKLMAEHTGQTLDKVSQDTDRDNFLSAEAAVEYG 208          
BLAST of EY728481 vs. ExPASy Swiss-Prot
Match: CLPP_ANASK (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain K) GN=clpP PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.801e-38
Identity = 88/166 (53.01%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  332 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLCINSPGGSVTAGMGIYDAMKLCKADVXTICLGLAASMGAFLLAAGFKGKRYCMPNARSMIHXXPGDCWRQSNRYEHTD*RDVLPQGKADKILSRATGKAVQQIELDTGRDNFMDAWEAKNTG 829
            D  + LL+ RIIFLG+ VDD  A+ II+QLLFL++ED  KDI L INSPGGSVT+G+ IYD M+  K  V TICLG AASMGAFLLA G  GKR+ +PNAR MIH   G    Q+   E      +  + K ++I++R T + +++IE DT RD FM A EAK  G
Sbjct:   21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQLSGGFQGQATDIEIQAKEALRLKAKLNEIMARHTRQPIERIERDTERDYFMSAGEAKEYG 186          
The following BLAST results are available for this feature:
BLAST of EY728481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_BURMA1.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM91.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BURM71.379e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_BACHD1.379e-3851.81ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_PSEMY1.801e-3851.20ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_METFK1.801e-3853.46ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_EUBE21.801e-3850.62ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DIAST1.801e-3851.19ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_COLP31.801e-3850.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ANASK1.801e-3853.01ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728481 ID=EY728481; Name=EY728481; organism=Citrus sinensis; type=EST; length=875bp
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAACTGAACCCACCC
AGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATCTTCA
TTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCCACTT
TCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACGAGGA
GACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACAGACC
TTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATACTTC
ATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATGCTTC
TCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGACTGCT
GATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTAAAAA
AGATATCAGGTTGTGTATTAATTCACCTGGTGGCTCTGTTACTGCTGGAA
TGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTNNTCACTATT
TGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTGGGTT
CAAAGGGAAGAGATATTGCATGCCTAATGCAAGAAGTATGATCCATCNAN
CTCCTGGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGATTAA
AGAGATGTCTTACCACAGGGTAAGGCTGACAAGATATTATCTAGAGCTAC
CGGAAAGGCTGTGCAGCAGATTGAGCTGGACACTGGACGTGATAATTTCA
TGGATGCTTGGGAAGCAAAGAATACGGGGTGGTAAATGCGTCTCCGGTGA
TGGGAGCCGGAATAGTGGCCCTATT
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