EY728479

Overview
NameEY728479
Unique NameEY728479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_FUSNP (Chaperone protein dnaJ OS=Fusobacterium nucleatum subsp. polymorphum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 41/76 (53.95%), Postives = 56/76 (73.68%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD---------PEKFKELAQAYEVLSDPQKREIYDQYGEDALKE 292
            YYE+LGV KNAS++D+KKAYRKAA+K HPDK  +          EKFKE+ +AY+VLSD +K++ YDQ+G  A ++
Sbjct:    6 YYEVLGVDKNASENDIKKAYRKAAMKYHPDKFANATDAEKKDAEEKFKEINEAYQVLSDNEKKQQYDQFGHAAFEQ 81          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_DICT6 (Chaperone protein dnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 2
Query:   68 PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYG 274
            P K D   YYEILGV +NA+QD++K+AYR+   + HPD   DP   EKFKE+ +AYEVLSDPQKR  YDQ+G
Sbjct:    2 PTKKD---YYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQKRAQYDQFG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_BURTA (Chaperone protein dnaJ OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LGV+KNAS D++KKAYRK A+K HPD+  D     E FKE  +AYE+LSD QKR  YDQYG
Sbjct:    6 YYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDSKDAEEHFKEAKEAYEMLSDSQKRAAYDQYG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGE 277
            YYEILGVSKNA+++++KKAYRK + K HPD   +P   EKFKE+ +AYEVLSD QKR  YDQ+G+
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQ 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein dnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 70/227 (30.84%), Postives = 94/227 (41.41%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPF-----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSXKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIXQMQHPCNECKGTGET--SMTRIAGHHVRVRRSIPRKNLGGIVEKGIK 739
            YYEIL VS+NAS +++KK+YRK   K HPDK  GD    EKFK++++AYEVLS+P+KR  YD+YG                 F     DI                        D+ + ++VSLED + G    +S   NV                           V  R         ++  CN C G GE   +  R  G   RVR  +   +L   V KGI+
Sbjct:    6 YYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKGIKVPISYVTNVKCSSCSGIGSEGAVNSVKCGNCNGAGSVRTR----KGFLTIEEVCNVCNGEGEVIKNKCRRCGGSGRVRNEV---SLLVTVPKGIE 225          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMF (Chaperone protein dnaJ OS=Anaplasma marginale (strain Florida) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 70/227 (30.84%), Postives = 94/227 (41.41%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPF-----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSXKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIXQMQHPCNECKGTGET--SMTRIAGHHVRVRRSIPRKNLGGIVEKGIK 739
            YYEIL VS+NAS +++KK+YRK   K HPDK  GD    EKFK++++AYEVLS+P+KR  YD+YG                 F     DI                        D+ + ++VSLED + G    +S   NV                           V  R         ++  CN C G GE   +  R  G   RVR  +   +L   V KGI+
Sbjct:    6 YYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKGIKVPISYVTNVKCSSCSGIGSEGAVNSVKCGNCNGAGSVRTR----KGFLTIEEVCNVCNGEGEVIKNKCRRCGGSGRVRNEV---SLLVTVPKGIE 225          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_THISH (Chaperone protein dnaJ OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYEILGV+KNAS+ +LKKA+R+ A+K+HPD+  GD    EKFKE  +AYE+L+DPQKR  YDQ+G
Sbjct:    6 YYEILGVAKNASEAELKKAFRRLAMKHHPDRNPGDKESEEKFKEAKEAYEILTDPQKRAAYDQFG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYGED 280
            YYE+LGVSK+AS+D++KKAYRK + K HPD   + G  EKFKE+++AYEVLSD  KR  YDQ+G D
Sbjct:    6 YYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEGAEEKFKEISEAYEVLSDENKRANYDQFGHD 71          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYGED 280
            YYE+LG+SK+AS+D++KKAYRK + K HPD   + G  EKFKE+++AYEVLSD  KR  YDQ+G D
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD 71          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYGED 280
            YYE+LG+SK+AS+D++KKAYRK + K HPD   + G  EKFKE+++AYEVLSD  KR  YDQ+G D
Sbjct:    6 YYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHD 71          
The following BLAST results are available for this feature:
BLAST of EY728479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_FUSNP4.917e-1653.95Chaperone protein dnaJ OS=Fusobacterium nucleatum ... [more]
DNAJ_DICT64.917e-1659.72Chaperone protein dnaJ OS=Dictyoglomus thermophilu... [more]
DNAJ_BURTA4.917e-1663.08Chaperone protein dnaJ OS=Burkholderia thailandens... [more]
DNAJ_BACST4.917e-1663.08Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_ANAMM4.917e-1630.84Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_ANAMF4.917e-1630.84Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_THISH6.421e-1663.08Chaperone protein dnaJ OS=Thioalkalivibrio sp. (st... [more]
DNAJ_STACT6.421e-1662.12Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_STAAW6.421e-1660.61Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAT6.421e-1660.61Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728479 ID=EY728479; Name=EY728479; organism=Citrus sinensis; type=EST; length=803bp
CCACGCGTCCGCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGA
AGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCACAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAANAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCANCAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAT
CAATGACAAGGATCGCTGGCCACCATGTAAGGGTGAGAAGGTCGATCCCG
AGAAAAAATCTTGGAGGTATTGTTGAAAAGGGGATCAAATGGACNAAAAT
ACTTCCTCGAAACTGAGAACGCCCACCGCCCGTGACTGTTTGTCTCACAA
AGA
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