EY728479

Overview
NameEY728479
Unique NameEY728479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     +KFKE ++AYEVLSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_TREDE (Chaperone protein dnaJ OS=Treponema denticola GN=dnaJ PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LGV K AS DD+KKAYRK AIK HPDK  GD    EKFKE  +AYE+L D +KR +YDQ+G
Sbjct:    8 YYEVLGVDKKASNDDIKKAYRKLAIKYHPDKNQGDKAAEEKFKEATEAYEILIDEKKRSMYDQFG 72          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAC (Chaperone protein dnaJ OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            +YE+LGV KNAS +++KKAYRK A+K+HPD+  GD      EKFKE  +AYE+LSDPQKR  YDQ+G
Sbjct:    6 FYEVLGVPKNASDEEIKKAYRKLAMKHHPDRNQGDAAKPAEEKFKEAKEAYEMLSDPQKRAAYDQFG 72          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DJB12_MOUSE (DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG---GDPEKFKELAQAYEVLSDPQKREIYDQYGED 280
            YYEILGVS++AS +DLKKAYRK A+K HPDK    G  E FK +  AY VLS+P+KR+ YDQ+G+D
Sbjct:  112 YYEILGVSRSASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGDD 177          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype Ia GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +NT++Y+ LGVSK+ASQD++KKAYR+ + K HPD   + G  EK+KE+ +AYE LSD QKR  YDQYG
Sbjct:    2 NNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEAGAEEKYKEVQEAYETLSDTQKRAAYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_RALSO (Chaperone protein dnaJ OS=Ralstonia solanacearum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LGV KNAS D++KKAYRK A+K HPD+  D     EKFKE  +AYE+LSD  K+  YDQYG
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEMLSDADKKAAYDQYG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_METPP (Chaperone protein dnaJ OS=Methylibium petroleiphilum (strain PM1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE LGV+KNAS++D+KKAYRK A+K+HPD+  GD      E FKE  +AYE+LSD QKR  YDQYG
Sbjct:    6 YYETLGVAKNASEEDIKKAYRKLAMKHHPDRNQGDGAKKAEESFKEAKEAYEMLSDAQKRAAYDQYG 72          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LG+SK+AS D++KKAYRK + + HPD   + G  EKFKE+++AYEVLSD QKR  YDQYG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_LARHH (Chaperone protein dnaJ OS=Laribacter hongkongensis (strain HLHK9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            +Y++LGV+++AS DD+KKAYRK A+K HPD+  D     EKFKE  +AYE+LSD QKR  YDQYG
Sbjct:    6 FYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDSKDAEEKFKEAKEAYEILSDAQKRAAYDQYG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOSW (Chaperone protein dnaJ OS=Geobacillus sp. (strain WCH70) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYG 274
            YYEILGVSKNA+++++KKAYRK + K HPD   +P   EKFKE+ +AYEVLSD QKR  YDQ+G
Sbjct:    6 YYEILGVSKNATKEEIKKAYRKLSKKYHPDINKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFG 69          
The following BLAST results are available for this feature:
BLAST of EY728479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ACIAD6.421e-1657.14Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_TREDE8.387e-1664.62Chaperone protein dnaJ OS=Treponema denticola GN=d... [more]
DNAJ_ACIAC8.387e-1661.19Chaperone protein dnaJ OS=Acidovorax avenae subsp.... [more]
DJB12_MOUSE8.387e-1662.12DnaJ homolog subfamily B member 12 OS=Mus musculus... [more]
DNAJ_STRA11.095e-1558.82Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_RALSO1.095e-1561.54Chaperone protein dnaJ OS=Ralstonia solanacearum G... [more]
DNAJ_METPP1.095e-1562.69Chaperone protein dnaJ OS=Methylibium petroleiphil... [more]
DNAJ_LISW61.095e-1562.50Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_LARHH1.095e-1560.00Chaperone protein dnaJ OS=Laribacter hongkongensis... [more]
DNAJ_GEOSW1.095e-1564.06Chaperone protein dnaJ OS=Geobacillus sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728479 ID=EY728479; Name=EY728479; organism=Citrus sinensis; type=EST; length=803bp
CCACGCGTCCGCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGA
AGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCACAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAANAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCANCAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAT
CAATGACAAGGATCGCTGGCCACCATGTAAGGGTGAGAAGGTCGATCCCG
AGAAAAAATCTTGGAGGTATTGTTGAAAAGGGGATCAAATGGACNAAAAT
ACTTCCTCGAAACTGAGAACGCCCACCGCCCGTGACTGTTTGTCTCACAA
AGA
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