EY728479

Overview
NameEY728479
Unique NameEY728479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFD 331
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L            PF+
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16
Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFD 331
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L            PF+
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGKEGLNGGGGGGSHFDSPFE 88          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNG 454
            +Y+ILGV+KNA+ + +KKAYRK A + HPD+  D E    KF++L+ AYEVLSD +KR +YD++GE+ + +        HDPF                          DV   L V+LE++YNG
Sbjct:   25 FYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFS--SFFGDFFGGGGGHGGEEGTPKGADVTIDLFVTLEEVYNG 147          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 50/125 (40.00%), Postives = 69/125 (55.20%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNG 454
            +Y+ILGVSKNA+ + +KKAYRK A + HPD+  D E    KF++L+ AYEVLSD +KR +YD++GE+ + +        HDPF                          DV   L V+LE+ YNG
Sbjct:   25 FYKILGVSKNANANQIKKAYRKQAKELHPDRNPDDEMANEKFQDLSAAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFS--SFFGDFFGGGGGNGGDEGTPKGADVTIDLFVTLEEAYNG 147          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT2 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGED 280
            +NT+YY+ LG+SK+ASQD++K+AYRK + K HPD   +P   EK+KE+ +AYE LSD QKR  YDQYG D
Sbjct:    2 NNTEYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPD 71          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT1 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGED 280
            +NT+YY+ LG+SK+ASQD++K+AYRK + K HPD   +P   EK+KE+ +AYE LSD QKR  YDQYG D
Sbjct:    2 NNTEYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPD 71          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGED 280
            YY ILG+SK AS +++KKAYRK A+K HPDK  GD    ++FKE+++AYEVLSDPQKR+ YD++G+D
Sbjct:    3 YYSILGISKTASAEEIKKAYRKLAVKYHPDKNPGDAAAEKRFKEVSEAYEVLSDPQKRDSYDRFGKD 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DJB10_MOUSE (DnaJ homolog subfamily B member 10 OS=Mus musculus GN=Dnajb10 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDAL 286
            YYEIL V ++AS DD+KKAYRK A++ HPDK  D      +KFKE+A+AYEVLSD  KREIYD+YG + L
Sbjct:    4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LGV+KNAS +DLKKAYRK A+K HPD+  D     EKFKE  +AYEVL D QKR  YD+YG
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LGV+KNAS +DLKKAYRK A+K HPD+  D     EKFKE  +AYEVL D QKR  YD+YG
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYG 70          
The following BLAST results are available for this feature:
BLAST of EY728479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB6_HUMAN1.294e-1649.41DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNJB6_BOVIN1.294e-1649.41DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNJ20_CAEEL1.690e-1639.20DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DNJ20_CAEBR1.690e-1640.00DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNAJ_STRT21.690e-1658.57Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STRT11.690e-1658.57Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_CHLPN1.690e-1661.19Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DJB10_MOUSE1.690e-1661.43DnaJ homolog subfamily B member 10 OS=Mus musculus... [more]
DNAJ_BORPE2.207e-1664.62Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA2.207e-1664.62Chaperone protein dnaJ OS=Bordetella parapertussis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728479 ID=EY728479; Name=EY728479; organism=Citrus sinensis; type=EST; length=803bp
CCACGCGTCCGCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGA
AGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCACAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAANAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCANCAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAT
CAATGACAAGGATCGCTGGCCACCATGTAAGGGTGAGAAGGTCGATCCCG
AGAAAAAATCTTGGAGGTATTGTTGAAAAGGGGATCAAATGGACNAAAAT
ACTTCCTCGAAACTGAGAACGCCCACCGCCCGTGACTGTTTGTCTCACAA
AGA
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