EY728479

Overview
NameEY728479
Unique NameEY728479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LGV+KNAS +DLKKAYRK A+K HPD+  D     EKFKE  +AYEVL D QKR  YD+YG
Sbjct:    6 YYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYG 70          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 40/70 (57.14%), Postives = 55/70 (78.57%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDAL 286
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJB6_MOUSE (DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 40/70 (57.14%), Postives = 55/70 (78.57%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDAL 286
            YYE+LGV ++AS +D+KKAYRK A+K HPDK  +       KFK++A+AYEVLSD +KR+IYD+YG++ L
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGL 73          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNJB6_CHICK (DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFD 331
            YYE+LGV K+AS +D+KKAYRK A+K HPDK  +      ++FK++A+AYEVLSD +KR+IYD++G++ L           +PF+
Sbjct:    4 YYEVLGVQKHASAEDIKKAYRKLALKWHPDKNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYDRFGKEGLINGGGGGSHHDNPFE 88          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 63/198 (31.82%), Postives = 88/198 (44.44%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD-----KGGDPEKFKELAQAYEVLSDPQKREIYDQY--------GEDALKEXXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSXKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIXQMQHPCNECKGTG 643
            YY+ILGV +NAS++D+KKA+R+ A K HPD     K    EKFKE+++AYEVLSDP+KR IYDQ         G +   +        +D F +I                        D+   L +SLE+ Y GT  ++   RN I                     G+G +  +R  G   +  +   CN C G G
Sbjct:    5 YYKILGVDRNASEEDIKKAFRELAKKWHPDLHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYDQTGSVDFGGGGSNFNWDNFTHFSDINDIFNEIFGGNFGSDFFSGFGNRQSTRNIDLDMYTNLDISLEEAYYGTEKRIKFRRNAICPDCKGTGAKNGKLITCPTCHGTGQQRVVRGQGFFRMVTVT-TCNTCGGKG 201          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRPY (Chaperone protein dnaJ OS=Streptococcus pyogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +NT+YY+ LGVSK+ASQDD+KKAYRK + K HPD   + G  +K+K++ +AYE LSD QKR  YDQYG
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP8 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M18 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +NT+YY+ LGVSK+ASQDD+KKAYRK + K HPD   + G  +K+K++ +AYE LSD QKR  YDQYG
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP6 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M6 GN=dnaJ PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +NT+YY+ LGVSK+ASQDD+KKAYRK + K HPD   + G  +K+K++ +AYE LSD QKR  YDQYG
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP3 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M3 GN=dnaJ PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +NT+YY+ LGVSK+ASQDD+KKAYRK + K HPD   + G  +K+K++ +AYE LSD QKR  YDQYG
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRP1 (Chaperone protein dnaJ OS=Streptococcus pyogenes serotype M1 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.882e-16
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 2
Query:   80 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +NT+YY+ LGVSK+ASQDD+KKAYRK + K HPD   + G  +K+K++ +AYE LSD QKR  YDQYG
Sbjct:    2 NNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYG 69          
The following BLAST results are available for this feature:
BLAST of EY728479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BORBR2.207e-1664.62Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNJB6_RAT2.882e-1657.14DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNJB6_MOUSE2.882e-1657.14DnaJ homolog subfamily B member 6 OS=Mus musculus ... [more]
DNJB6_CHICK2.882e-1648.24DnaJ homolog subfamily B member 6 OS=Gallus gallus... [more]
DNAJ_THEVO2.882e-1631.82Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ_STRPY2.882e-1660.29Chaperone protein dnaJ OS=Streptococcus pyogenes G... [more]
DNAJ_STRP82.882e-1660.29Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_STRP62.882e-1660.29Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_STRP32.882e-1660.29Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]
DNAJ_STRP12.882e-1660.29Chaperone protein dnaJ OS=Streptococcus pyogenes s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728479 ID=EY728479; Name=EY728479; organism=Citrus sinensis; type=EST; length=803bp
CCACGCGTCCGCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGA
AGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCACAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAANAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCANCAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAT
CAATGACAAGGATCGCTGGCCACCATGTAAGGGTGAGAAGGTCGATCCCG
AGAAAAAATCTTGGAGGTATTGTTGAAAAGGGGATCAAATGGACNAAAAT
ACTTCCTCGAAACTGAGAACGCCCACCGCCCGTGACTGTTTGTCTCACAA
AGA
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