EY728479

Overview
NameEY728479
Unique NameEY728479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMH (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LG+SK+AS D++KKAYRK + + HPD   + G  EKFKE+++AYE LSDPQKR  YDQYG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_LISIN (Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            YYE+LG+SK+AS D++KKAYRK + + HPD   + G  EKFKE+++AYE LSDPQKR  YDQYG
Sbjct:    6 YYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYG 69          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 289
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD +KR +YD+ G +A +
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFE 75          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGD---PEKFKELAQAYEVLSDPQKREIYDQYGEDAL 286
            YYE+LGV +NAS+ ++KKAYRK AIK HPDK  GD    +KFKE+++AY +LSD Q+R IYDQYG   L
Sbjct:    6 YYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGL 74          
BLAST of EY728479 vs. ExPASy Swiss-Prot
Match: DNAJ_JANMA (Chaperone protein dnaJ OS=Janthinobacterium sp. (strain Marseille) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 39/65 (60.00%), Postives = 52/65 (80.00%), Query Frame = 2
Query:   92 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG----GDPEKFKELAQAYEVLSDPQKREIYDQYG 274
            +YEILGV K+AS +++KKAYRK A+K+HPD+     G  +KFKE  +AYE+LSDPQKR+ YD+YG
Sbjct:    6 FYEILGVGKSASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYG 70          
The following BLAST results are available for this feature:
BLAST of EY728479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LISMH3.765e-1662.50Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISIN3.765e-1662.50Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ... [more]
DNAJ_ACIBY3.765e-1657.14Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT3.765e-1657.14Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS3.765e-1657.14Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC3.765e-1657.14Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB53.765e-1657.14Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB33.765e-1657.14Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_PELCD4.917e-1660.87Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_JANMA4.917e-1660.00Chaperone protein dnaJ OS=Janthinobacterium sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728479 ID=EY728479; Name=EY728479; organism=Citrus sinensis; type=EST; length=803bp
CCACGCGTCCGCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAGA
AGATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAG
ATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTA
TAGGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGA
AGTTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCACAGAAG
CGTGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGG
TGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCG
GTGGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGG
GGAGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAA
TGGGACATCTAANAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGT
GCAAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGC
CAGGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGAT
TCANCAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAT
CAATGACAAGGATCGCTGGCCACCATGTAAGGGTGAGAAGGTCGATCCCG
AGAAAAAATCTTGGAGGTATTGTTGAAAAGGGGATCAAATGGACNAAAAT
ACTTCCTCGAAACTGAGAACGCCCACCGCCCGTGACTGTTTGTCTCACAA
AGA
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