EY728470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_SHIFL (GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 46/136 (33.82%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 420 RI+WL + WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G++ + AK+ G +V T+ L + +EIIT + + WL + T R KI + R+Q Sbjct: 373 RIAWLRKLIAWQEEMAD---SGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRSKIHAWFRKQ 499
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_ECOLI (GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 46/136 (33.82%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 420 RI+WL + WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G++ + AK+ G +V T+ L + +EIIT + + WL + T R KI + R+Q Sbjct: 373 RIAWLRKLIAWQEEMAD---SGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRSKIHAWFRKQ 499
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_ECOL6 (GTP pyrophosphokinase OS=Escherichia coli O6 GN=relA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 46/136 (33.82%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 420 RI+WL + WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G++ + AK+ G +V T+ L + +EIIT + + WL + T R KI + R+Q Sbjct: 373 RIAWLRKLIAWQEEMAD---SGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRSKIHAWFRKQ 499
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_ECO57 (GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.418e-16 Identity = 46/136 (33.82%), Postives = 75/136 (55.15%), Query Frame = 1 Query: 25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 420 RI+WL + WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G++ + AK+ G +V T+ L + +EIIT + + WL + T R KI + R+Q Sbjct: 373 RIAWLRKLIAWQEEMAD---SGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRSKIHAWFRKQ 499
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: SPOT_VIBCH (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio cholerae GN=spoT PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15 Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 34 WLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 414 W+ ++ E Q+ GN S EF++ + DL ++VFTP+G I LP GAT VD+AY +HT+IGN V A+V+ + L + + VEII+ +A WL + T AR KI + L+ Sbjct: 359 WMQSLLELQQS-AGN--SFEFIENVKSDLFPDEIYVFTPKGRIVELPMGATAVDFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSGQTVEIISAPGARPNAA------WLNYVVTSRARTKIRQVLK 476
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_PHOAS (GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG 15956) GN=relA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARHKIMKFLREQ 420 +I+WL + WQEE S E +D + + RV+ FTP+G++ +LP AT +D+AY IH+E+G++ + AKV G +V T+ L + VEIIT + + WL + AR K+ + R+Q Sbjct: 372 KINWLRKLLAWQEEM---SDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPSNATPLDFAYHIHSEVGHRCIGAKVEGRIVPFTYHLQMGDQVEIITQKEPNPS------RDWLNPNLGFVTSSRARAKVHAWFRKQ 498
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: SPOT_SPICI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Spiroplasma citri GN=spoT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14 Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 106 ITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITAD 453 I D+ S ++V TP G++ LP G+TV+D+AY IH+EIG K + AK+NG + VL + +VV+I T A + K + WL +KT SA KI K+L+++ E+T+D Sbjct: 400 IQNDIFSSLIYVLTPNGKVVTLPFGSTVLDFAYKIHSEIGEKTIGAKINGLFSPISTVLKSGDVVDIKT--AATQKP----NHSWLVVSKTSSALEKIKKYLKKELV----EVTSD 505
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: RELA_HAEIN (GTP pyrophosphokinase OS=Haemophilus influenzae GN=relA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14 Identity = 43/132 (32.58%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 25 RISWLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 420 +I+WL + WQ++ S E + + + RV+VFTP+GE+ +LP G+T +D+AY IH+EIG++ + AKV G +V T+ L + ++IIT + + H T +R KI + ++Q Sbjct: 373 KIAWLRKLLAWQDDITD---SGEVLAELRSQVFDDRVYVFTPKGEVVDLPTGSTPLDFAYAIHSEIGHRCIGAKVAGRIVPFTYQLQMGDQIDIITQKNPNPSRDWLNPNLGFTH--TAKSRAKIQAWFKKQ 499
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: SPOT_SHIFL (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Shigella flexneri GN=spoT PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-13 Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 34 WLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 414 W+ ++ E Q+ +S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V+ + L + + VEIIT +A WL + AR KI + L+ Sbjct: 358 WMQSLLELQQSAG---SSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
BLAST of EY728470 vs. ExPASy Swiss-Prot
Match: SPOT_ECOLI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli (strain K12) GN=spoT PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-13 Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 34 WLNAIREWQEEFVGNMTSREFVDTITRDLLCSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 414 W+ ++ E Q+ +S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V+ + L + + VEIIT +A WL + AR KI + L+ Sbjct: 358 WMQSLLELQQSAG---SSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475 The following BLAST results are available for this feature:
BLAST of EY728470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728470 ID=EY728470; Name=EY728470; organism=Citrus sinensis; type=EST; length=892bpback to top |