EY728468

Overview
NameEY728468
Unique NameEY728468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728468_ssr491 microsatellite EY728468_ssr491:491..502. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_PYRIL (Orotate phosphoribosyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=pyrE PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.522e-24
Identity = 67/195 (34.36%), Postives = 113/195 (57.95%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLK-ENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXK 636
            +I +  E+  VKFG F+L SG+ SP YIDLR ++  P LLR + +     L    K+D++ GV    +P A+ +  +   P+   R E K++GT + IEG        ++I+D++T+G S++     +R+AG +V  AVV +DREQ G  N+K   G+E++++ K+  ++   R K  +DEE  R V+ +L + +
Sbjct:    1 MIEKFLELGVVKFGIFRLSSGLESPFYIDLRNVLGEPELLRWVIEQYREIL-LRLKFDIIVGVATGGIPYASILGYTLGKPISYVRPEAKEHGTGRLIEGAEVSGREVVVIDDVLTTGKSIIGAINAIRSAGGIVAGAVVFLDREQCGSRNIKTATGVEVYSVYKMRGLLD--RLKDYIDEEQYRSVINYLAQWR 192          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_METMJ (Orotate phosphoribosyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pyrE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.988e-24
Identity = 66/165 (40.00%), Postives = 98/165 (59.39%), Query Frame = 1
Query:   67 LHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 561
            L E  A++FG F L SG  S  YID++   + P++L +I KTI        ++++V GV   A+PIA  VS+++  P  + RKE KD+G A  I G+   + + L++ED+ TSG S L     LRAAG  V   V ++DRE G RE L E G  L A++++SE++
Sbjct:    9 LLECGAIEFGEFVLASGARSSYYIDIKAATTNPAVLTEIGKTIAEG----REFEMVAGVAVGAVPIAVAVSLASGRPYAVVRKEGKDHGKAGTIIGDVLGKNV-LLVEDVTTSGGSALYGLEALRAAGAHVDQVVTVVDREAGAREALAEKGASLLALVRVSELL 168          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_THEAC (Orotate phosphoribosyltransferase OS=Thermoplasma acidophilum GN=pyrE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24
Identity = 63/171 (36.84%), Postives = 102/171 (59.65%), Query Frame = 1
Query:   46 MESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEM 558
            M  L   L  + A+KFG+F L SG  S  Y+D++   + PS+LR+I+      + S+     + G+   A+P+    ++   +P ++ RKE + +GT   + G F+K E   +IED+VT+G SVL+    LR  G VV  A  ++DRE+GG + LKENGI+LH +I++S++
Sbjct:    1 MGGLEEDLLRVGAIKFGDFVLTSGKRSTYYVDIKEAATDPSVLRKIASEFSGMIRSSK----IAGMELGAVPLIVATALQMSIPYIIVRKE-RSHGTMSLLVGKFEKGEEIDVIEDVVTTGNSVLKAVNTLRENGAVVKRAYCVVDREEGGSDLLKENGIDLHPIIRISQV 166          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_METST (Orotate phosphoribosyltransferase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=pyrE PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24
Identity = 62/172 (36.05%), Postives = 97/172 (56.40%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVL 570
            LI  L E + +KFG F L SG  S  Y+D++  ++ P +L  ++  I + +      D + G    A+PIAT  S+ +  PMLM RK  K YGT+K IEG   + +  +I+ED+ T+G S+L+    +   G  +  A V++DRE+G +E  KEN IE   ++ +SE  + L
Sbjct:    8 LINLLKENNVIKFGKFTLSSGRESDYYVDMKKAITEPEILDCVAHLITNEIEHDN-IDKIAGPALGAVPIATATSLISKKPMLMIRKAKKTYGTSKQIEGELLENDDVVIVEDVTTTGGSLLKAINVIEDNGGNIVKAFVIVDREEGAQETFKENNIEFTPLLTISEFKKYL 178          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_METJA (Orotate phosphoribosyltransferase OS=Methanocaldococcus jannaschii GN=pyrE PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24
Identity = 60/168 (35.71%), Postives = 97/168 (57.74%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEM 558
            LI  L E+  ++FG F L SG  S  YID++   + P +L+ + + I   +        V GV   ++PIAT VS+    P+L+ RK+ KDYGT   IEG  K+ +  +I+ED+ T+G SVL+    +R  G +V    V++DR +G +ENL++  +EL  ++ + E+
Sbjct:    7 LINLLKEVGCIRFGEFILASGKKSNYYIDIKKATTNPEILKLVGEIIAEQIKDEDVK--VAGVELGSVPIATAVSIIAQKPLLIVRKKPKDYGTKNKIEGELKEGDKVVIVEDVTTTGGSVLKAVKEIRENGGIVDKVFVVVDRLEGAKENLQKENVELIPLVTVKEL 172          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_HALSA (Orotate phosphoribosyltransferase OS=Halobacterium salinarium GN=pyrE PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24
Identity = 58/171 (33.92%), Postives = 95/171 (55.56%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 561
            + L+  L    AV+FG F+L  G +S  Y+D  L  + P  L  I+      +   T    + GV    +P+A   +    VP ++ RK+ K+YGTA  IEG     E  +++ED+ T+G S ++    LR AG  V  A++++DRE+GGRE L E+G+E+ A++  S+++
Sbjct:    5 DDLVSALRAADAVQFGEFELSHGGTSEYYVDKYLFETDPECLSAIAAAFADRIDEDTT---LAGVALGGVPLAAATATEAGVPYVIARKQAKEYGTANRIEGRLDDGEEVVVVEDIATTGQSAVDAVDALRDAGATVNRALIVVDREEGGRELLAEHGVEMAALVTASDLL 172          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_METMA (Orotate phosphoribosyltransferase OS=Methanosarcina mazei GN=pyrE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 59/172 (34.30%), Postives = 98/172 (56.98%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVR 564
            + LI  L    AV++G+F L SG  S  YID++   + P  L+ I++     +      D V GV    +P+AT VS+  ++P+L+ RK +KDYGT     G+ K E+  +++ED+ TSG SV +    +R AG  +   + ++DRE+G  E LKE  +EL  ++  S++++
Sbjct:   17 QELIAALKACGAVRYGDFTLASGKKSKYYIDIKKASTDPKTLKIIARQAALRIKEMD-VDTVAGVELGGVPLATAVSLETELPLLIVRKSVKDYGTKSRFVGDLKPEDRLVMLEDVTTSGGSVRDAIEVVREAGASLKYVITVVDREEGAGEKLKEADVELVPLVSASDLLK 187          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_PYRAE (Orotate phosphoribosyltransferase OS=Pyrobaculum aerophilum GN=pyrE PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.198e-23
Identity = 68/195 (34.87%), Postives = 111/195 (56.92%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLK-ENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXK 636
            +I +L +I AVKFG FKL SG+ SP Y+DLR ++  P L + + +   + L S  ++D++ GV    +P A+ +      PM   R E K YGT + IEG     +   +++D++T+G SVL     +RA+G  V   VV +DR Q G E +K E G+ ++++ K+ E++  LR    + EE  R V+ +L + +
Sbjct:    1 MIKRLVDIGAVKFGAFKLSSGLESPFYVDLRSVLGEPELFQWVIERYEAVL-SGLEFDVIIGVATGGIPYASVLGYRLKKPMGYVRDEAKGYGTGRQIEGADVAGKRAAVVDDVLTTGKSVLNAIRAVRASGGEVAGVVVFLDRGQCGAEAVKREAGVYVYSVYKMRELLEELRP--HIGEERYRSVLDYLSQWR 192          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STAMF (Orotate phosphoribosyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pyrE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 63/203 (31.03%), Postives = 113/203 (55.67%), Query Frame = 1
Query:   31 MSSHS-MESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXK 636
            M+S S +E ++L+L+     K G ++L SG  SP YIDLR++ SY  +  +I    +S L     +D+V G+    +  A+ ++     P+   RK+ K +GT + +EG      + L+++D+ T+G S+      +R+ G +V  A V +DRE+G RE LK  G+EL +++ +  ++ VL +   +DE+T  ++  +L   K
Sbjct:    1 MNSESVLEEIVLELYRNKLFKIGEYRLTSGKISPYYIDLRILPSYYDIYSKIIDISLSKLEKLN-FDIVVGIESAGIIHASFIACKTHKPVGYVRKKPKQHGTKRLVEGIVADRNV-LVVDDVATTGGSLEHAVNAVRSMGGIVEKAFVFVDREEGARERLKRLGVELISLMNIWFIINVLVKHRLIDEQTYYLIKNYLNREK 201          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_METTH (Orotate phosphoribosyltransferase OS=Methanobacterium thermoautotrophicum GN=pyrE PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.395e-23
Identity = 61/167 (36.53%), Postives = 99/167 (59.28%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSE 555
            LI  L E+  V+ G F L SG  S  Y+D++  V+ P++L  I++ I  +     + D + G    A+PIAT VS+ +  P+LM RKE K YGT+K IEG+ +K +   ++ED+ T+G S+L+    ++  G +V  A V++DRE+G  +  K  GI L  ++ +S+
Sbjct:   13 LIELLSEMDVVQRGKFILSSGRESDYYVDIKRAVTEPAVLDVIARLIADA---AGEVDRIAGPALGAVPIATAVSLYSRKPLLMIRKEKKGYGTSKLIEGDLQKGDRVAVVEDVTTTGGSLLKAVRAIQENGGIVEKAFVIVDREEGAVDEFKREGITLIPLLSVSD 176          
The following BLAST results are available for this feature:
BLAST of EY728468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PYRE_PYRIL1.522e-2434.36Orotate phosphoribosyltransferase OS=Pyrobaculum i... [more]
PYRE_METMJ1.988e-2440.00Orotate phosphoribosyltransferase OS=Methanoculleu... [more]
PYRE_THEAC4.429e-2436.84Orotate phosphoribosyltransferase OS=Thermoplasma ... [more]
PYRE_METST5.784e-2436.05Orotate phosphoribosyltransferase OS=Methanosphaer... [more]
PYRE_METJA5.784e-2435.71Orotate phosphoribosyltransferase OS=Methanocaldoc... [more]
PYRE_HALSA7.555e-2433.92Orotate phosphoribosyltransferase OS=Halobacterium... [more]
PYRE_METMA9.867e-2434.30Orotate phosphoribosyltransferase OS=Methanosarcin... [more]
PYRE_PYRAE2.198e-2334.87Orotate phosphoribosyltransferase OS=Pyrobaculum a... [more]
PYRE_STAMF2.871e-2331.03Orotate phosphoribosyltransferase OS=Staphylotherm... [more]
PYRE_METTH6.395e-2336.53Orotate phosphoribosyltransferase OS=Methanobacter... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728468 ID=EY728468; Name=EY728468; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCCCAAAAGGCAGAAACGCAATGTCGTCGCATTCGATGGA
GTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCGGAAACT
TTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTCCGACTT
ATCGTTTCGTACCCTTCCCTCCTCCGCCAAATATCCAAAACCATCATCTC
CTCCCTCCCCTCCACAACCAAATACGACCTCGTGTGCGGCGTTCCGTACA
CCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTCCCCATG
CTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCAAGGCCATCGA
AGGCAATTTCAAGAAGGAAGAAATCTGTCTGATCATCGAAGATTTAGTCA
CCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCGGCGGGG
CTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGGAGGGAG
GGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAAAGCTGA
GCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAGGAAACG
GAGAGAGTGGTGATGAAGTTTTTGGAGGAAAANAAGAAAGTGGCGGGTTC
GAATTTAAGTGGGGTTAGGGTTAGGGTTTAGGGTTTGAAGTACGAAAAAA
GGGCGATTTGATGAAGAATGAGACTGGGAAAAAATGTTCAAGTGATGGTG
AAAAANGAAAATAATTGTGTTTGCTGGTGATGTTGCCCTGNTGCTGAGTT
GGTCAATTTGCGAGAAGGTGGGCCAAGATCTGGTGTGGAAACCAGGTGAT
ATTTTGCTGATTCCCCGCGAATTGGTGCAANTTGTGGC
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