EY728468

Overview
NameEY728468
Unique NameEY728468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728468_ssr491 microsatellite EY728468_ssr491:491..502. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LISMO (Orotate phosphoribosyltransferase OS=Listeria monocytogenes GN=pyrE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1
Query:   64 QLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGL-VVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKK 639
            QL EI AV       F   SGI SP+Y D RL + +P + + I+K++   +  T  + D+V G     +P A  VS   D+PM+  R + K++G    IEG   K +  ++IEDL+++G S L+    L  AG  VV  A +       G++ L+E+G +L  +    E++ V   +  +  E     M+ L+E KK
Sbjct:   10 QLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGED----METLKEWKK 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LISMF (Orotate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pyrE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1
Query:   64 QLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGL-VVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKK 639
            QL EI AV       F   SGI SP+Y D RL + +P + + I+K++   +  T  + D+V G     +P A  VS   D+PM+  R + K++G    IEG   K +  ++IEDL+++G S L+    L  AG  VV  A +       G++ L+E+G +L  +    E++ V   +  +  E     M+ L+E KK
Sbjct:   10 QLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEVDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGED----METLKEWKK 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_FUSNN (Orotate phosphoribosyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=pyrE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.603e-16
Identity = 54/202 (26.73%), Postives = 99/202 (49.01%), Query Frame = 1
Query:   19 GRNAMSSHSMESLI-LQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVM 615
            G N ++   + +L+ ++  E+   K   F   SGI SP+Y D RL +SYP + +QI++  +  +       D + G     +P A  +S   D+PML  R   KD+G    IEG F+K +  ++IEDL+++G S +  A  L+  GL V   + +        +E   E  I    +     ++ + +E G + ++  ++++
Sbjct:    4 GINMLNREIINALLDIKAVELRVDKENWFTWASGIKSPIYCDNRLTMSYPKIRKQIAEGFVKKINELYPNVDYIVGTATAGIPHAAWISDIMDLPMLYVRGSAKDHGKTNQIEGKFEKGKKVVVIEDLISTGKSSVLAAQALQEEGLEVLGVIAIFSYNLNKAKEKFDEAKIPFSTLTNYDVLLELAKETGLIGDKENQILI 205          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_ROSDO (Orotate phosphoribosyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pyrE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 60/209 (28.71%), Postives = 97/209 (46.41%), Query Frame = 1
Query:   55 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTK-------YDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVV--TDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGSN 654
            ++L++H +       F L SG+ SP YID R ++S+P    +I  T++  L  T         +D + G     +P A  V+    +PM   RK+ K YG    IEG   + E  L++EDL T G S L     +R  G     T  +   D      + L ++G+ LH++    +++   +++G  DE T   V KFL   +K   +N
Sbjct:   19 MLLEIHAVHFNAKDPFTLSSGLPSPTYIDCRKLISFP----RIRATLMDFLTVTVMRDVGFEAFDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMGEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIFYYDIFPETTKTLGDHGVALHSLCTWWDVLAEAKQQGVFDEATLSEVEKFLHNPRKWQEAN 223          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_AGRRK (Orotate phosphoribosyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pyrE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.798e-16
Identity = 65/212 (30.66%), Postives = 101/212 (47.64%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYP---SLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVL----IDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGSN 654
            E +   L EI AV F     +KL SG++SPVYID R ++SYP   S +   + ++I       ++D V G     +P A  ++   ++PM+  RK+ K +G    IEG+       L+IEDL T+G S+      +RAAG +V   + L    I  E   R       + LH +     ++ V +E+   D++T   V  FL      +G N
Sbjct:   14 ELVAKMLWEIKAVHFSADKPYKLASGMASPVYIDCRKLISYPRVRSTVMDFAASLIMRDAGFEQFDCVAGGETAGIPFAAFLAERLNLPMIYVRKQPKGHGRNSQIEGHMPDGARVLVIEDLTTAGGSMFTFIDAIRAAGGIVDHGMALFYYGIFPEAEAR--FANGKVRLHHIATWRNVLAVAKEQKLFDDKTLEEVEAFLNAPLAWSGRN 223          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LACLS (Orotate phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=pyrE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 49/199 (24.62%), Postives = 95/199 (47.74%), Query Frame = 1
Query:   37 SHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLE 627
            S ++ + +L++  +S      F   SGI SP+Y D R+ ++YP +  QI       + +   + +++ G     +P    ++    +P    R + KD+G    +EG   K +  +++EDL+++G SVLE        G  V   V +   E +       E+G++L  +   SE++ + +E G + +E   ++ KF E
Sbjct:    4 SKAIAADLLEIKAVSLSPSQPFTWASGIKSPIYTDNRVTLAYPEVRSQIEGAFAELIKAEFPEVEVIAGTATAGIPHGAIIADYLKLPFAYIRSKPKDHGAGNQVEGRVAKGQKMVVVEDLISTGGSVLEAVAAAEREGADVLGVVAIFTYELEKANSKFAESGVKLATLTNYSELIEIAKETGYVTKEELELLKKFKE 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_DESAD (Orotate phosphoribosyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=pyrE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.572e-16
Identity = 63/194 (32.47%), Postives = 94/194 (48.45%), Query Frame = 1
Query:   67 LHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSL---LRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE--QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFL 624
            L E+ AV F     FK  SG +SPVYID R ++S+P +   L     ++I         D V G     +P A  +S    +PM   RK+ K +G    IEG+F +    L++EDL T G S +  A  LR AG  VT   VL         +E L E G+E+ ++    +++ V +++   D ++   V KFL
Sbjct:   20 LIEVEAVHFRADEPFKFTSGWASPVYIDCRKLISFPRVRNTLMDFGASVILREVGFESIDCVAGGETAGIPFAAWLSDRLMLPMQYVRKKPKGFGRDAQIEGDFAEGSKVLLVEDLTTDGRSKINFAQALRKAGAEVTHTFVLFHYGIFPKAKETLAEAGLEMLSLANWWDILNVAKKEKYFDNKSLEEVEKFL 213          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRPG (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pyrE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 55/194 (28.35%), Postives = 94/194 (48.45%), Query Frame = 1
Query:   64 QLHEISAVKF---GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 630
            QL +I AV       F   SGI SP+Y D R+ +SYP     I    + ++ +   + +++ G     +P    ++    +P    R ++KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   10 QLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIRAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKLKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_RHILT (Orotate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii GN=pyrE PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 59/192 (30.73%), Postives = 91/192 (47.40%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL---PSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETER 606
            E L   L EI AV F     +KL SG++SPVYID R ++S+P +   +     S+L       ++D + G     +P A  ++    +PM+  RK+ K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L      G +   +  + LH    ++    VL   G     T R
Sbjct:   14 ELLAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFEQFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGGSMFKFIDAVRAAGGIVDHGIALFFYGIFGEQRFADGKVRLH---HIATWRNVLPSPGSRSSSTTR 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRT2 (Orotate phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=pyrE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.687e-15
Identity = 48/178 (26.97%), Postives = 85/178 (47.75%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLE 627
            F   SGI SP+Y D R+ +SYP     I    +  +     + +++ G     +P    ++   ++P    R + KD+G    IEG   K E  +++EDL+++G SVL+        G  V   V +   E     +N  E G++L  +   +E+++V + KG +  +  R++ KF E
Sbjct:   25 FTWASGIKSPIYTDNRITLSYPETRTLIENGFVKKIKEEFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVVKGEKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAEKNFAEAGVKLVTLSNYTELIKVAKVKGYITADGLRLLKKFKE 202          
The following BLAST results are available for this feature:
BLAST of EY728468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PYRE_LISMO2.603e-1631.98Orotate phosphoribosyltransferase OS=Listeria mono... [more]
PYRE_LISMF2.603e-1631.98Orotate phosphoribosyltransferase OS=Listeria mono... [more]
PYRE_FUSNN2.603e-1626.73Orotate phosphoribosyltransferase OS=Fusobacterium... [more]
PYRE_ROSDO4.439e-1628.71Orotate phosphoribosyltransferase OS=Roseobacter d... [more]
PYRE_AGRRK5.798e-1630.66Orotate phosphoribosyltransferase OS=Agrobacterium... [more]
PYRE_LACLS7.572e-1624.62Orotate phosphoribosyltransferase OS=Lactococcus l... [more]
PYRE_DESAD7.572e-1632.47Orotate phosphoribosyltransferase OS=Desulfovibrio... [more]
PYRE_STRPG1.292e-1528.35Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_RHILT1.292e-1530.73Orotate phosphoribosyltransferase OS=Rhizobium leg... [more]
PYRE_STRT21.687e-1526.97Orotate phosphoribosyltransferase OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728468 ID=EY728468; Name=EY728468; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCCCAAAAGGCAGAAACGCAATGTCGTCGCATTCGATGGA
GTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCGGAAACT
TTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTCCGACTT
ATCGTTTCGTACCCTTCCCTCCTCCGCCAAATATCCAAAACCATCATCTC
CTCCCTCCCCTCCACAACCAAATACGACCTCGTGTGCGGCGTTCCGTACA
CCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTCCCCATG
CTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCAAGGCCATCGA
AGGCAATTTCAAGAAGGAAGAAATCTGTCTGATCATCGAAGATTTAGTCA
CCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCGGCGGGG
CTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGGAGGGAG
GGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAAAGCTGA
GCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAGGAAACG
GAGAGAGTGGTGATGAAGTTTTTGGAGGAAAANAAGAAAGTGGCGGGTTC
GAATTTAAGTGGGGTTAGGGTTAGGGTTTAGGGTTTGAAGTACGAAAAAA
GGGCGATTTGATGAAGAATGAGACTGGGAAAAAATGTTCAAGTGATGGTG
AAAAANGAAAATAATTGTGTTTGCTGGTGATGTTGCCCTGNTGCTGAGTT
GGTCAATTTGCGAGAAGGTGGGCCAAGATCTGGTGTGGAAACCAGGTGAT
ATTTTGCTGATTCCCCGCGAATTGGTGCAANTTGTGGC
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