EY728468

Overview
NameEY728468
Unique NameEY728468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728468_ssr491 microsatellite EY728468_ssr491:491..502. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRP6 (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M6 GN=pyrE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 1
Query:   64 QLHEISAVKF---GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 630
            QL +I AV       F   SGI SP+Y D R+ +SYP     I    + ++ +   + +++ G     +P    ++    +P    R + KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   10 QLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIRAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRP3 (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M3 GN=pyrE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 1
Query:   64 QLHEISAVKF---GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 630
            QL +I AV       F   SGI SP+Y D R+ +SYP     I    + ++ +   + +++ G     +P    ++    +P    R + KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   10 QLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIRAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LACLA (Orotate phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=pyrE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15
Identity = 48/199 (24.12%), Postives = 94/199 (47.24%), Query Frame = 1
Query:   37 SHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLE 627
            S ++ + +L++  +S      F   SGI SP+Y D R+ ++YP +  QI       + +   + +++ G     +P    ++    +P    R + KD+G    +EG   K +  +++EDL+++G SVLE        G  V   V +   E +       + G++L  +   SE++ + +E G + +E   ++ KF E
Sbjct:    4 SKAIAADLLEIKAVSLSPSQPFTWASGIKSPIYTDNRVTLAYPEVRSQIEGAFAELIKAEFPEVEVIAGTATAGIPHGAIIADYLKLPFAYIRSKPKDHGAGNQVEGRVTKGQKMVVVEDLISTGGSVLEAVAAAEREGADVLGVVAIFTYELEKANRKFADAGVKLATLTTYSELIEIAKETGYVTKEELELLKKFKE 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_VIBFM (Orotate phosphoribosyltransferase OS=Vibrio fischeri (strain MJ11) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 54/192 (28.12%), Postives = 97/192 (50.52%), Query Frame = 1
Query:   73 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVS------NDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 609
            E   +KFG F LKSG  SP + +  L  +   L R       +   S  +YD++ G  Y  +PIAT  +V+       D P    RKE KD+G    + G+  +  I ++++D++T+G ++ E+   ++A G  +   +V IDR++ G+  L       ++    + +++ L++++  L EKG   E+ E V
Sbjct:   14 EKEVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLARLGRFYAAALADSGIEYDVLFGPAYKGIPIATTTAVALADHHDTDKPYCFNRKEAKDHGEGGNLVGSALEGRI-MLVDDVITAGTAIRESMEIIQANGADLAGVLVAIDRQEKGKGELSAIQEVERDFNCSIISIVSLTDLISFLEEKGDNAEQLEAV 204          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRPD (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 50/179 (27.93%), Postives = 87/179 (48.60%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 630
            F   SGI SP+Y D R+ +SYP     I    + ++ +   + +++ G     +P    ++    +P    R + KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   25 FTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIRAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LISIN (Orotate phosphoribosyltransferase OS=Listeria innocua GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 61/197 (30.96%), Postives = 97/197 (49.24%), Query Frame = 1
Query:   64 QLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGL-VVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKK 639
            QL EI AV       F   SGI SP+Y D RL + +P + + I+K++   +     + D+V G     +P A  VS   D+PM+  R + K++G    IEG   K +  ++IEDL+++G S L+    L  AG  V+  A +       G++ L+E+  +L  +    E++ V   K  +  E     M  L+E KK
Sbjct:   10 QLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKENFGEVDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPLTKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVLGIAAIFTYGLDKGKKLLEESNTKLVTLTNYDELIEVALNKNYVTTED----MATLKEWKK 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_AGRT5 (Orotate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 61/203 (30.05%), Postives = 95/203 (46.80%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYP---SLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVL----IDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLE 627
            E +   L EI AV F +   +   SG+ SPVYID+R ++S+P   S     +   +       K+D V G     +P A  ++    +PM+  RK+ K +G    IEG+       L+IEDL T+G S+      +RAAG +V   + L    I  E   R       ++LH +    +++ V R +   DE+T   V  FL+
Sbjct:   14 ELVAKMLWEIKAVHFNSESPYTFASGMKSPVYIDMRKLISFPRIRSAAMDFAAAAVMREAGFEKFDCVAGGETAGIPFAAFLAERLGLPMIYCRKKPKGHGRNAQIEGHMPDGARVLVIEDLTTAGGSMFTFIDAIRAAGGIVDHGIALFYYGIFEEAEAR--FANGNVKLHYLTTWRDVLAVARAEKLFDEKTLSGVEAFLD 214          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_VESOH (Orotate phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15
Identity = 55/190 (28.95%), Postives = 102/190 (53.68%), Query Frame = 1
Query:   49 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVS------NDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGR------ENLKEN-GIELHAMIKLSEMVRVLRE 576
            E  +  + +  A+KFGNF LKSG  SP + ++  + +    L Q+ K    ++ ++   +D++ G  Y  +P+ T  +V+       DV     RKE+K YG    I G+  +  I LII+D++T+G ++ E    ++A G  V   +V +DR++ G+      + +++N GI + ++I LS +V  L++
Sbjct:    6 EDFVEFILDSGALKFGNFTLKSGRISPYFFNVG-VFNTGQYLSQLGKFYAIAIENSGLDFDVLFGPSYKGIPLVTATAVAFNNNFNKDVSYSFNRKEVKTYGEGGGIVGHSLEGNI-LIIDDVITAGTAIHEAVDIIKANGATVKGVIVAVDRQEKGKSGQSAIQEVEQNFGISVFSIINLSNVVDYLKQ 193          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_MARAV (Orotate phosphoribosyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 55/190 (28.95%), Postives = 101/190 (53.16%), Query Frame = 1
Query:   79 SAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLP-STTKYDLVCGVPYTALPIATCVSVS-----NDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 609
            + ++FG F LKSG +SP + +  L  +   LL ++SK   +++  S   YD++ G  Y  +P+AT  +++     N  P    RKE KD+G    I G   + ++ LI++D++T+G ++ E+   +RAAG      ++ +DR++ G   L       KE GI + ++I+L +++  L+   +     E V
Sbjct:   16 NVLRFGEFTLKSGRTSPYFFNAGLFNTGNDLL-ELSKAYAAAIARSGLDYDIIFGPAYKGIPLATVTAMALATDGNSKPFAFNRKEKKDHGEGGNIVGAPLQGKV-LIVDDVITAGTAIRESIDIIRAAGAEPAGVLIALDRQEKGNGELSAIQEVEKEFGIPVVSIIRLEQVLDYLKSNPEFAGHAENV 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_ENTFA (Orotate phosphoribosyltransferase OS=Enterococcus faecalis GN=pyrE PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 50/182 (27.47%), Postives = 90/182 (49.45%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKK 639
            F   SGI SP+Y D R+ +SYP++ ++I++ + + +  T  + +++ G     +P A  V+    +PM+  R + KD+G    IEG   + +  ++IEDL+++G SVLE A      G  V     +   E   G  N  +  + L  +   S ++    E   ++E+     +  L+E KK
Sbjct:   26 FTWASGIKSPIYCDNRITMSYPAVRKEIAEGLAAKIKETFPEVEVIAGTATAGIPHAAWVADILGLPMVYIRSKAKDHGKGNQIEGRISEGQKMVVIEDLISTGGSVLEAAEAAEREGATVLGVAAIFTYELPKGTANFADKQMTLLTLTNYSTLIDAALEANYIEEKD----VTLLQEWKK 203          
The following BLAST results are available for this feature:
BLAST of EY728468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PYRE_STRP64.908e-1528.35Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_STRP34.908e-1528.35Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_LACLA4.908e-1524.12Orotate phosphoribosyltransferase OS=Lactococcus l... [more]
PYRE_VIBFM6.410e-1528.13Orotate phosphoribosyltransferase OS=Vibrio fische... [more]
PYRE_STRPD6.410e-1527.93Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_LISIN6.410e-1530.96Orotate phosphoribosyltransferase OS=Listeria inno... [more]
PYRE_AGRT56.410e-1530.05Orotate phosphoribosyltransferase OS=Agrobacterium... [more]
PYRE_VESOH8.372e-1528.95Orotate phosphoribosyltransferase OS=Vesicomyosoci... [more]
PYRE_MARAV1.093e-1428.95Orotate phosphoribosyltransferase OS=Marinobacter ... [more]
PYRE_ENTFA1.093e-1427.47Orotate phosphoribosyltransferase OS=Enterococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728468 ID=EY728468; Name=EY728468; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCCCAAAAGGCAGAAACGCAATGTCGTCGCATTCGATGGA
GTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCGGAAACT
TTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTCCGACTT
ATCGTTTCGTACCCTTCCCTCCTCCGCCAAATATCCAAAACCATCATCTC
CTCCCTCCCCTCCACAACCAAATACGACCTCGTGTGCGGCGTTCCGTACA
CCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTCCCCATG
CTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCAAGGCCATCGA
AGGCAATTTCAAGAAGGAAGAAATCTGTCTGATCATCGAAGATTTAGTCA
CCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCGGCGGGG
CTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGGAGGGAG
GGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAAAGCTGA
GCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAGGAAACG
GAGAGAGTGGTGATGAAGTTTTTGGAGGAAAANAAGAAAGTGGCGGGTTC
GAATTTAAGTGGGGTTAGGGTTAGGGTTTAGGGTTTGAAGTACGAAAAAA
GGGCGATTTGATGAAGAATGAGACTGGGAAAAAATGTTCAAGTGATGGTG
AAAAANGAAAATAATTGTGTTTGCTGGTGATGTTGCCCTGNTGCTGAGTT
GGTCAATTTGCGAGAAGGTGGGCCAAGATCTGGTGTGGAAACCAGGTGAT
ATTTTGCTGATTCCCCGCGAATTGGTGCAANTTGTGGC
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