EY728468

Overview
NameEY728468
Unique NameEY728468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728468_ssr491 microsatellite EY728468_ssr491:491..502. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRMU (Orotate phosphoribosyltransferase OS=Streptococcus mutans GN=pyrE PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14
Identity = 47/178 (26.40%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLE 627
            F   SGI SP+Y D R+ +SYP     I    + ++     + +++ G     +P    ++   ++P    R + KD+G    IEG   K +  +IIEDL+++G SVL+     +  G  V   V +   E      N ++  ++L  +   SE+++V + +G +D +   ++ KF E
Sbjct:   25 FTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSELIKVAKVQGYIDADGLTLLKKFKE 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_BACHD (Orotate phosphoribosyltransferase OS=Bacillus halodurans GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14
Identity = 60/210 (28.57%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   49 ESLILQLHEISAVKF---GNFKLKSGISSPVYIDLRLIVSYPSLLRQISK----TIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKKVAGSN 654
            E++   L +I AV       F   SGI SP+Y D RL + YP + + I++     I S  P  T   +V G     +P A  VS     PM+  R + K +G    IEG    ++  +IIEDL+++G SV++ A  LR AG  V   V +     + G++ L+   +  + +     ++ V   +G + EE  + + K+ E     +  N
Sbjct:    3 ETIAQHLLDIEAVTLRPNDPFTWSSGIKSPIYCDNRLTMGYPHIRQSIAEGFEQLIRSHFPEVT---VVAGTATAGIPHAAWVSDRLQAPMVYVRSKSKGHGKQNQIEGKLSSKDRVVIIEDLISTGGSVIQAADALREAGADVLGVVAIFTYGLEKGQDQLEAANLPSYVLTDYPTLLDVAIRRGDISEEELQKLQKWRENPSSQSWMN 209          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_VIBPA (Orotate phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 53/192 (27.60%), Postives = 96/192 (50.00%), Query Frame = 1
Query:   73 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 609
            E   +KFG F LKSG  SP + +  L  +   L R       +   S  ++D++ G  Y  +PIAT  +V+       D P    RKE K++G    + G+  +  I ++++D++T+G ++ E+   ++A G  +   +V IDR++ G+  L       ++ G  + +++ L +++  L EKG   E  E V
Sbjct:   14 EKEVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLARLGRFYAAALADSGIEFDVLFGPAYKGIPIATTTAVALADHHDIDTPYCFNRKEAKNHGEGGNLVGSALEGRI-MLVDDVITAGTAIRESMEIIKANGADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIVSLGDLITYLEEKGNATEHLEAV 204          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_SHEON (Orotate phosphoribosyltransferase OS=Shewanella oneidensis GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 52/192 (27.08%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   73 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPSTTKYDLVCGVPYTALPIATCVSV------SNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 609
            E   ++FG F LKSG  SP + +  L  +   L R       + + S   YDL+ G  Y  +PIAT  +V      + D+P    RKE KD+G   ++ G+  K  + ++++D++T+G ++ E+   + A    +   ++ +DR++ G+  L       ++ G  + A+IKL++++  L EK +++ +   V
Sbjct:   14 ERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDSGIDYDLLFGPAYKGIPIATTTAVALCEHHNIDIPYCFNRKEKKDHGEGGSLVGSELKGRV-MLVDDVITAGTAIRESMEIIEAHQAQLAGVLIALDRQEKGKGELSAIQEVERDFGCGIVAIIKLADLISYLSEKPRMEAQLAAV 204          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_BACWK (Orotate phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 53/175 (30.29%), Postives = 90/175 (51.43%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQIS---KTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDE-ETERV 609
            F   SGI SP+Y D RL +SYP + + I+   + +I    ST   +++ G     +  A  VS   D+PM   R + K +G    IEG  +K +  +++EDL+++G S +     LR AG  V   V +   E + G+E L+   +  +++   S +  V  EKG + + ET+++
Sbjct:   23 FTWSSGIKSPIYCDNRLTLSYPKVRQAIAAGLEELIKEHFSTV--EVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGNQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELESGKEKLEAANVASYSLSDYSALTEVAAEKGMIGQAETKKL 195          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRPN (Orotate phosphoribosyltransferase OS=Streptococcus pneumoniae GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 44/179 (24.58%), Postives = 87/179 (48.60%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 630
            F   SGI SP+Y D R+ ++YP     I    + ++     + +++ G     +P    ++   D+P    R + KD+G    IEG   + +  +++EDL+++G SVLE     +  G  V   V +   +     +N  + G++L  +   SE++ + +E+G +  E   ++ +F E+
Sbjct:   25 FTWASGIKSPIYTDNRVTLAYPETRTLIENGFVEAIKEAFPEVEVIAGTATAGIPHGAIIADKMDLPFAYIRSKPKDHGAGNQIEGRVAQGQKMVVVEDLISTGGSVLEAVAAAKREGADVLGVVAIFSYQLPKADKNFADAGVKLVTLSNYSELIHLAQEEGYITPEGLDLLKRFKED 203          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LACPL (Orotate phosphoribosyltransferase OS=Lactobacillus plantarum GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 48/171 (28.07%), Postives = 92/171 (53.80%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL----PSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEE 597
            F   SGI SP+Y D RL +SYP++ + I+  I + +    P+T   +++ GV    +P A  V+   ++P++  R + KD+G  + IEG  K  +  ++++DL+++G SVL+ A  ++AAG  +     +         +N     + L ++    E+++V R+   +D+E
Sbjct:   26 FTWASGIKSPIYTDNRLTISYPAVRQHIAHGIAAIIKREYPAT---EVIAGVATAGIPHAAWVAELLNLPLIYVRAKPKDHGAGRQIEGVLKPGQKVVMLDDLISTGGSVLQAAKAVQAAGGDIQAVGAIFSYALDAATQNFAAASLPLFSLSNYPELIKVARQADYIDDE 193          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_LACLM (Orotate phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 47/199 (23.62%), Postives = 93/199 (46.73%), Query Frame = 1
Query:   37 SHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLE 627
            S ++ + +L++  +S      F   SGI SP+Y D R+ ++YP +  QI       + +   + +++ G     +P    ++    +P    R + KD+G    +EG   K +  +++EDL+++G SVLE        G  V   V +   E +       +  ++L  +   SE++ + +E G + +E   ++ KF E
Sbjct:    4 SKAIAADLLEIKAVSLSPSQPFTWASGIKSPIYTDNRVTLAYPEVRSQIEGAFAELIKTEFPEVEVIAGTATAGIPHGAIIADYLKLPFAYIRSKPKDHGAGNQVEGRVAKGQKMVVVEDLISTGGSVLEAVAAAEREGADVLGVVAIFTYELEKANSKFADADVKLATLTNYSELIEIAKETGYVTKEELELLKKFKE 202          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_BACC4 (Orotate phosphoribosyltransferase OS=Bacillus cereus (strain B4264) GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.436e-14
Identity = 54/185 (29.19%), Postives = 91/185 (49.19%), Query Frame = 1
Query:  100 FKLKSGISSPVYIDLRLIVSYPSLLRQIS----KTIISSLPSTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEXKK 639
            F   SG+ SP+Y D RL +SYP + + I+    + I    P+    +++ G     +  A  VS   D+PM   R + K +G    IEG  +K +  +++EDL+++G S +     LR AG  V   V +   E + G+E L+   +  +++   S +  V  EKG + +      MK L+E +K
Sbjct:   23 FTWSSGMKSPIYCDNRLTLSYPKVRQAIAAGLEELIKEHFPTV---EVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGNQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVVSYSLSDYSALTEVAAEKGMIGQ----AEMKKLQEWRK 200          
BLAST of EY728468 vs. ExPASy Swiss-Prot
Match: PYRE_STRMK (Orotate phosphoribosyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14
Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1
Query:   31 MSSHSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPST-TKYDLVCGVPYTALPIATCVSVS-----NDVPMLMRRKEIKDYGTAKAIEGNFKKEEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGREN---------LKENGIELHAMIKLSEMV 561
            MS H    L L L    A++FG F LKSG  SP + +     S  SLL Q+      ++ ++  KYD+V G  Y  +P+AT ++        D+P+   RKE KD+G    + G   + +  LI++D++T+G ++ E    +RAAG      VV +DR++   E           +E GI + A+  L++++
Sbjct:    1 MSDHRHRFLQLAL-TADALRFGQFTLKSGRLSPYFFNAGRFDS-GSLLSQLGACYADAIDASGIKYDVVFGPAYKGIPLATAMACELAQRGRDLPLSFNRKEAKDHGEGGQLIGADMQGKRVLIVDDVITAGTAIREALGIIRAAGGTPAGIVVALDRQEIASETDRRSAAQSVAEEAGIPVIAVASLADLL 190          
The following BLAST results are available for this feature:
BLAST of EY728468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 271
Match NameE-valueIdentityDescription
PYRE_STRMU1.428e-1426.40Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_BACHD1.428e-1428.57Orotate phosphoribosyltransferase OS=Bacillus halo... [more]
PYRE_VIBPA1.865e-1427.60Orotate phosphoribosyltransferase OS=Vibrio paraha... [more]
PYRE_SHEON1.865e-1427.08Orotate phosphoribosyltransferase OS=Shewanella on... [more]
PYRE_BACWK1.865e-1430.29Orotate phosphoribosyltransferase OS=Bacillus weih... [more]
PYRE_STRPN2.436e-1424.58Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_LACPL2.436e-1428.07Orotate phosphoribosyltransferase OS=Lactobacillus... [more]
PYRE_LACLM2.436e-1423.62Orotate phosphoribosyltransferase OS=Lactococcus l... [more]
PYRE_BACC42.436e-1429.19Orotate phosphoribosyltransferase OS=Bacillus cere... [more]
PYRE_STRMK3.181e-1430.73Orotate phosphoribosyltransferase OS=Stenotrophomo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728468 ID=EY728468; Name=EY728468; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCCCAAAAGGCAGAAACGCAATGTCGTCGCATTCGATGGA
GTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCGGAAACT
TTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTCCGACTT
ATCGTTTCGTACCCTTCCCTCCTCCGCCAAATATCCAAAACCATCATCTC
CTCCCTCCCCTCCACAACCAAATACGACCTCGTGTGCGGCGTTCCGTACA
CCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTCCCCATG
CTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCAAGGCCATCGA
AGGCAATTTCAAGAAGGAAGAAATCTGTCTGATCATCGAAGATTTAGTCA
CCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCGGCGGGG
CTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGGAGGGAG
GGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAAAGCTGA
GCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAGGAAACG
GAGAGAGTGGTGATGAAGTTTTTGGAGGAAAANAAGAAAGTGGCGGGTTC
GAATTTAAGTGGGGTTAGGGTTAGGGTTTAGGGTTTGAAGTACGAAAAAA
GGGCGATTTGATGAAGAATGAGACTGGGAAAAAATGTTCAAGTGATGGTG
AAAAANGAAAATAATTGTGTTTGCTGGTGATGTTGCCCTGNTGCTGAGTT
GGTCAATTTGCGAGAAGGTGGGCCAAGATCTGGTGTGGAAACCAGGTGAT
ATTTTGCTGATTCCCCGCGAATTGGTGCAANTTGTGGC
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